RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ADIPOR2Q86V24 386 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 AKAP1Q92667 903 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX1-201ENST00000261889 TRIM63Q969Q1 353 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 SPATA9Q9BWV2 254 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 LHX9Q9NQ69 397 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 HINT3Q9NQE9 182 aaKnown RBP12.17□□□□□ -0.46
SNX1-201ENST00000261889 KCND3Q9UK17 655 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 SEC16AO15027 2179 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 ZNF860A6NHJ4 632 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 J3QLW9 94 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 IMPA2O14732 288 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 SSNA1O43805 119 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 ZNF19P17023 458 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 DDCP20711 480 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 NOS3P29474 1203 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 MC3RP41968 323 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 PXNP49023 591 aaPredicted RBP12.17□□□□□ -0.46
SNX1-201ENST00000261889 SIM1P81133 766 aaPredicted RBP12.17□□□□□ -0.46
SNX1-201ENST00000261889 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 C9orf64Q5T6V5 341 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
SNX1-201ENST00000261889 OR51A7Q8NH64 312 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 ZSWIM3Q96MP5 696 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 RHBGQ9H310 441 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 FZD3Q9NPG1 666 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 ZSCAN32Q9NX65 697 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 OR6C2Q9NZP2 312 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 OR1A2Q9Y585 309 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 FAM171A2A8MVW0 826 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 CHP2O43745 196 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 PRKNO60260 465 aaPredicted RBP12.16□□□□□ -0.46
SNX1-201ENST00000261889 ABLIM3O94929 683 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 POU3F2P20265 443 aaPredicted RBP12.16□□□□□ -0.46
SNX1-201ENST00000261889 ZNF155Q12901 538 aaPredicted RBP12.16□□□□□ -0.46
SNX1-201ENST00000261889 ZNF793Q6ZN11 406 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 OR9A2Q8NGT5 310 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 GSDMCQ9BYG8 508 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 SEMA4CQ9C0C4 833 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 MYNNQ9NPC7 610 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 LGALS8O00214 317 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 C1QBP02746 253 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 PCCBP05166 539 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ANKRD34CP0C6C1 535 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 EPHA5P54756 1037 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ODF4Q2M2E3 257 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ZNF311Q5JNZ3 666 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 BOLLQ8N9W6 283 aaKnown RBP12.16□□□□□ -0.46
SNX1-201ENST00000261889 LYSMD1Q96S90 227 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ZNF346Q9UL40 294 aaKnown RBP12.16□□□□□ -0.46
SNX1-201ENST00000261889 TRPM6Q9BX84 2022 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 LRG1P02750 347 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 C8AP07357 584 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 UCHL1P09936 223 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 PDE7AQ13946 482 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 METTL2BQ6P1Q9 378 aaKnown RBP12.16□□□□□ -0.46
SNX1-201ENST00000261889 RNF165Q6ZSG1 346 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 TBC1D19Q8N5T2 526 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ZNF527Q8NB42 609 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 WDFY2Q96P53 400 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ZNF607Q96SK3 696 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 TMEM245Q9H330 911 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 SLC13A4Q9UKG4 626 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 KCNK6Q9Y257 313 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ATG4BQ9Y4P1 393 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 CDH10Q9Y6N8 788 aa12.16□□□□□ -0.46
SNX1-201ENST00000261889 ERI3O43414 337 aaKnown RBP12.15□□□□□ -0.46
SNX1-201ENST00000261889 DNAJB6O75190 326 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 ACRP10323 421 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 ACP2P11117 423 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 IRS1P35568 1242 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 GCGRP47871 477 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 MELKQ14680 651 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 GPR68Q15743 365 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 COL13A1Q5TAT6 717 aaPredicted RBP12.15□□□□□ -0.46
SNX1-201ENST00000261889 KHDRBS2Q5VWX1 349 aaKnown RBP12.15□□□□□ -0.46
SNX1-201ENST00000261889 BHLHB9Q6PI77 547 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 C17orf64Q86WR6 236 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 MORN4Q8NDC4 146 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 ZNF680Q8NEM1 530 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 PFN4Q8NHR9 129 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 TFGQ92734 400 aaPredicted RBP12.15□□□□□ -0.46
SNX1-201ENST00000261889 RAD51AP1Q96B01 352 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 ZNF689Q96CS4 500 aaPredicted RBP12.15□□□□□ -0.46
SNX1-201ENST00000261889 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 GLTPQ9NZD2 209 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 USP36Q9P275 1121 aaKnown RBP12.15□□□□□ -0.46
SNX1-201ENST00000261889 KIF26AQ9ULI4 1882 aaPredicted RBP12.15□□□□□ -0.46
SNX1-201ENST00000261889 TRAV27A0A087WT01 109 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 PRODHO43272 600 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 UBXN7O94888 489 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 HPXP02790 462 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 SYN1P17600 705 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 CERS1P27544 350 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 MAPK8P45983 427 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 PRLHRP49683 370 aa12.15□□□□□ -0.46
SNX1-201ENST00000261889 CLCNKAP51800 687 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms