RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 HID1Q8IV36 788 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 WDR92Q96MX6 357 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 NUSAP1Q9BXS6 441 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SEMA6AQ9H2E6 1030 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 GALNT9Q9HCQ5 603 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SCOCQ9UIL1 159 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PADI2Q9Y2J8 665 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 C2orf72A6NCS6 295 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 D6RAR5 112 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 C1QTNF3-AMACRE9PGA6 284 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 DIAPH2O60879 1101 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 TCN1P20061 433 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 CYP2A7P20853 494 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 KCNJ5P48544 419 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 UGT2B15P54855 530 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC35A2P78381 396 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 TRMT5Q32P41 509 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 KLHL12Q53G59 568 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SPRNQ5BIV9 151 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PPP4R4Q6NUP7 873 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 CAMKK1Q8N5S9 505 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PPP1R14AQ96A00 147 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 THTPAQ9BU02 230 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 LMF2Q9BU23 707 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PKD2L2Q9NZM6 624 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF221Q9UK13 617 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 FBXL2Q9UKC9 423 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 WIF1Q9Y5W5 379 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 A0A096LPI6 279 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 C15orf38-AP3S2A0A0A6YYH1 394 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 ARHGEF9O43307 516 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 VPS26AO75436 327 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 ADRB1P08588 477 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 UQCRC1P31930 480 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 MAP4K2Q12851 820 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SLAMF1Q13291 335 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 FKBP9P1Q75LS8 142 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 ARPINQ7Z6K5 226 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 RNF130Q86XS8 419 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 ACBD4Q8NC06 268 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 OR2L5Q8NG80 312 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PFN4Q8NHR9 129 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PHF21AQ96BD5 680 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 COPS7BQ9H9Q2 264 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SGK2Q9HBY8 427 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 MCCC2Q9HCC0 563 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 BTNL2Q9UIR0 455 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 YARS2Q9Y2Z4 477 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 FIS1Q9Y3D6 152 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 IDSB3KWA1 339 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 GYG2O15488 501 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 GALR2O43603 387 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SS18L1O75177 396 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 KCNK2O95069 426 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 LGI1O95970 557 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 OCM2P0CE71 109 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 OCMP0CE72 109 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 ESRRAP11474 423 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 GLB1P16278 677 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PLA2G16P53816 162 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SMU1Q2TAY7 513 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 SPDYE7PQ495Y7 208 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 C14orf28Q4W4Y0 310 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 OR4C11Q6IEV9 310 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 TAS2R42Q7RTR8 314 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 C5orf24Q7Z6I8 188 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PCDHB11Q9Y5F2 797 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 MAU2Q9Y6X3 613 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 IRGMA1A4Y4 181 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 FPGTO14772 594 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CLGNO14967 610 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 KIAA0513O60268 411 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC22A3O75751 556 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 IGLV3-1P01715 115 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 IMPDH2P12268 514 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF24P17028 368 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 JUNDP17535 347 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CDK5Q00535 292 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 PLOD1Q02809 727 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 HHEXQ03014 270 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ANKDD1AQ495B1 522 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 PAGE2BQ5JRK9 111 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 IGFL2Q6UWQ7 119 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF584Q8IVC4 421 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CCDC116Q8IYX3 515 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SMYD1Q8NB12 490 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 HS3ST6Q96QI5 342 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ARRDC1-AS1Q9H2J1 176 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ALG2Q9H553 416 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 DUSP21Q9H596 190 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 LRTM1Q9HBL6 345 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 C8orf4Q9NR00 106 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CLEC2DQ9UHP7 191 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 UGT2A1Q9Y4X1 527 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 AGAP5A6NIR3 686 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 EVPLLA8MZ36 301 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SMNDC1O75940 238 aaKnown RBP eCLIP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 UBXN7O94888 489 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF432O94892 652 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SEMA3DO95025 777 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms