RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LAPTM4BQ86VI4 370 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 ATOH1Q92858 354 aaPredicted RBP20.74■□□□□ 0.91
SIX3-201ENST00000260653 SLC22A11Q9NSA0 550 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 SIDT1Q9NXL6 827 aaKnown RBP20.74■□□□□ 0.91
SIX3-201ENST00000260653 THBS1P07996 1170 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 RYKP34925 604 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 GSSP48637 474 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 FOXL2P58012 376 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 SMIM11AP58511 58 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 BIKQ13323 160 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 LAIR2Q6ISS4 152 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 PWWP2BQ6NUJ5 590 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 COX15Q7KZN9 410 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 SATL1Q86VE3 508 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 CCDC71Q8IV32 467 aaPredicted RBP20.74■□□□□ 0.91
SIX3-201ENST00000260653 SLITRK4Q8IW52 837 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 ZNF321PQ8N8H1 164 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 CLIP3Q96DZ5 547 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 ITPAQ9BY32 194 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 NTNG1Q9Y2I2 539 aa20.74■□□□□ 0.91
SIX3-201ENST00000260653 CPSF4LA6NMK7 179 aaKnown RBP20.73■□□□□ 0.91
SIX3-201ENST00000260653 D6RAR5 112 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 E9PQ18 207 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 FAAHO00519 579 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 OR10H3O60404 316 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 IGKV1D-16P01601 117 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 DBIP07108 87 aaKnown RBP20.73■□□□□ 0.91
SIX3-201ENST00000260653 AGXTP21549 392 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 TRHRP34981 398 aaPredicted RBP20.73■□□□□ 0.91
SIX3-201ENST00000260653 DUSP3P51452 185 aaPredicted RBP20.73■□□□□ 0.91
SIX3-201ENST00000260653 TAS2R41P59536 307 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 CNIH3Q8TBE1 160 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 SENP5Q96HI0 755 aaPredicted RBP20.73■□□□□ 0.91
SIX3-201ENST00000260653 ADNPQ9H2P0 1102 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 AASSQ9UDR5 926 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 RARRES3Q9UL19 164 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 R4GN57 208 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 CT45A8P0DMV1 189 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 CT45A9P0DMV2 189 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 RPL5P46777 297 aaKnown RBP20.73■□□□□ 0.91
SIX3-201ENST00000260653 FLYWCH1Q4VC44 716 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 LIN52Q52LA3 116 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 CT45A2Q5DJT8 189 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 PODNL1Q6PEZ8 512 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 B3GNT8Q7Z7M8 397 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 TMEM151BQ8IW70 566 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 PITX2Q99697 317 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 VN1R1Q9GZP7 353 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 MKKSQ9NPJ1 570 aaPredicted RBP20.73■□□□□ 0.91
SIX3-201ENST00000260653 MKL2Q9ULH7 1088 aa20.73■□□□□ 0.91
SIX3-201ENST00000260653 TCRBV16S1A1N1A0A5B0 115 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 SH3PXD2BA1X283 911 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 KHNYNO15037 678 aaKnown RBP20.72■□□□□ 0.91
SIX3-201ENST00000260653 SCRG1O75711 98 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 NID1P14543 1247 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 LSM11P83369 360 aaKnown RBP eCLIP20.72■□□□□ 0.91
SIX3-201ENST00000260653 C6orf141Q5SZD1 244 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 MRPL2Q5T653 305 aaKnown RBP20.72■□□□□ 0.91
SIX3-201ENST00000260653 KLHL17Q6TDP4 642 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 BMP8AQ7Z5Y6 402 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 SETD9Q8NE22 299 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 APMAPQ9HDC9 416 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 CACNA1HO95180 2353 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 PRKNO60260 465 aaPredicted RBP20.72■□□□□ 0.91
SIX3-201ENST00000260653 OXSR1O95747 527 aaPredicted RBP20.72■□□□□ 0.91
SIX3-201ENST00000260653 CCNYL3P0C7X3 344 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 NSDHLQ15738 373 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 EIPR1Q53HC9 387 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 SHISA6Q6ZSJ9 500 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 FBLIM1Q8WUP2 373 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 DIO2Q92813 273 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 HRASLS5Q96KN8 279 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 YTHDF1Q9BYJ9 559 aaKnown RBP20.72■□□□□ 0.91
SIX3-201ENST00000260653 POLE3Q9NRF9 147 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 OCIAD1Q9NX40 245 aa20.72■□□□□ 0.91
SIX3-201ENST00000260653 LNP1A1A4G5 178 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 NTN3O00634 580 aaPredicted RBP20.71■□□□□ 0.91
SIX3-201ENST00000260653 SOX30O94993 753 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 ENTPD8Q5MY95 495 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 ADAMTS16Q8TE57 1224 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 HDAC2Q92769 488 aaKnown RBP20.71■□□□□ 0.91
SIX3-201ENST00000260653 APOL4Q9BPW4 351 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 OR8D2Q9GZM6 311 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 Q9N2J8 555 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 SEMA4GQ9NTN9 838 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 FTSJ1Q9UET6 329 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 PCDHGA6Q9Y5G7 932 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 CLCA3PQ9Y6N3 262 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 BCAS1O75363 584 aaPredicted RBP20.71■□□□□ 0.91
SIX3-201ENST00000260653 SLC37A1P57057 533 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 PGBD2Q6P3X8 592 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 NLGN4XQ8N0W4 816 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 PARP8Q8N3A8 854 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 UBE2FQ969M7 185 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 MCHR1Q99705 422 aa20.71■□□□□ 0.91
SIX3-201ENST00000260653 WDFY3Q8IZQ1 3526 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 CDHR4A6H8M9 788 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 GDF9O60383 454 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 ADAP00813 363 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 CRHBPP24387 322 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms