RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 G6PC3Q9BUM1 346 aa14.55□□□□□ -0.08
CCDC90B-201ENST00000260054 SAP130Q9H0E3 1048 aa14.55□□□□□ -0.08
CCDC90B-201ENST00000260054 MMADHCQ9H3L0 296 aaPredicted RBP14.55□□□□□ -0.08
CCDC90B-201ENST00000260054 SLC7A8Q9UHI5 535 aa14.55□□□□□ -0.08
CCDC90B-201ENST00000260054 MRTO4Q9UKD2 239 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-201ENST00000260054 ANGPT4Q9Y264 503 aa14.55□□□□□ -0.08
CCDC90B-201ENST00000260054 WDR45Q9Y484 360 aa14.55□□□□□ -0.08
CCDC90B-201ENST00000260054 TPRP12270 2363 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 NPIPA5A0A0B4J1W7 369 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 CENPVL1A0A0U1RR11 272 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 OR6C70A6NIJ9 312 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 NPIPA7E9PJI5 369 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 NPIPA8P0DM63 369 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 CYP4B1P13584 511 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 NAGAP17050 411 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 GGT1P19440 569 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 ATP6V1C1P21283 382 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 PNLIPRP2P54317 469 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 PSMD4P55036 377 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 PCBP3P57721 371 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 MS4A2Q01362 244 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 GPR68Q15743 365 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 AP1ARQ63HQ0 302 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 OPN5Q6U736 354 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 ISLR2Q6UXK2 745 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 IL20RBQ6UXL0 311 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 HMGN2P46Q86SG4 172 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 TMEM156Q8N614 296 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 OR5M3Q8NGP4 307 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 FIG4Q92562 907 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 CRELD1Q96HD1 420 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 COL21A1Q96P44 957 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 QRSL1Q9H0R6 528 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 BCL2L10Q9HD36 194 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 POLE3Q9NRF9 147 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 ANKRD10Q9NXR5 420 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 CALML5Q9NZT1 146 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 FLRT3Q9NZU0 649 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 SUCOQ9UBS9 1254 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 ZMIZ1Q9ULJ6 1067 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 ACACBO00763 2458 aa14.54□□□□□ -0.08
CCDC90B-201ENST00000260054 CXCR6O00574 342 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 KIAA0513O60268 411 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 F10P00742 488 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 GUSBP08236 651 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 TMED10P49755 219 aaKnown RBP14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 CRYBA2P53672 197 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 NTRK2Q16620 822 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 TBR1Q16650 682 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 FLYWCH1Q4VC44 716 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 PRAMEF8Q5VWM4 474 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 PRAMEF7Q5VXH5 474 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 BORAQ6PGQ7 559 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 SLC30A8Q8IWU4 369 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 ZNF619Q8N2I2 560 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 TNIP2Q8NFZ5 429 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 OR4C3Q8NH37 302 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 BBS10Q8TAM1 723 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 HGDQ93099 445 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 KCNE5Q9UJ90 142 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 ZNF451Q9Y4E5 1061 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 CPAMD8Q8IZJ3 1885 aa14.53□□□□□ -0.08
CCDC90B-201ENST00000260054 A0A0G2JPF8 293 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 HNRNPCL2B2RXH8 293 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 HNRNPCL3B7ZW38 293 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 ANKRD65E5RJM6 399 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 NPIPB9F8W1W9 429 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 GSTA4O15217 222 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 ABCB7O75027 752 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 ICOSLGO75144 302 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 UTS2O95399 124 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 WDPCPO95876 746 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 HNRNPCL4P0DMR1 293 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 BNIP2Q12982 314 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 MFAP5Q13361 173 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 TRIM25Q14258 630 aaKnown RBP14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 INTS11Q5TA45 600 aaKnown RBP14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 GLYATQ6IB77 296 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 OR10G3Q8NGC4 313 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 ASB9Q96DX5 294 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 NODALQ96S42 347 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 HPF1Q9NWY4 346 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 PLA2G3Q9NZ20 509 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 PCDHGA10Q9Y5H3 936 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 EXPH5Q8NEV8 1989 aa14.52□□□□□ -0.08
CCDC90B-201ENST00000260054 ACOT8O14734 319 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 ARPC2O15144 300 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 UGT2B17O75795 530 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 DCTP40126 519 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 HLCSP50747 726 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 TUBA3CQ13748 450 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 MAPK14Q16539 360 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 GRAMD1BQ3KR37 738 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 TUBA3EQ6PEY2 450 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 CCDC80Q76M96 950 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 NUP54Q7Z3B4 507 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 ZNF227Q86WZ6 799 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 FAM13CQ8NE31 585 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 EXTL1Q92935 676 aa14.52□□□□□ -0.09
CCDC90B-201ENST00000260054 RSPO3Q9BXY4 272 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms