RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 Q8N402 240 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 ASCC1Q8N9N2 400 aaKnown RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 SLC16A11Q8NCK7 471 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 NEIL3Q8TAT5 605 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 ENKURQ8TC29 256 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 FGF13Q92913 245 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 SLC41A3Q96GZ6 507 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 TTYH2Q9BSA4 534 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 RANGRFQ9HD47 186 aaPredicted RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 IL20RAQ9UHF4 553 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 CBLCQ9ULV8 474 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 LINC01553A4QN01 128 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 GABRPO00591 440 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 CHST10O43529 356 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 HCN1O60741 890 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 KAT7O95251 611 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 SLC2A10O95528 541 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 CMPK1P30085 196 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 HTR1FP30939 366 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 GJA4P35212 333 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 EVX1P49640 407 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 STXBP1P61764 594 aaKnown RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 BTN3A2P78410 334 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 P2RY14Q15391 338 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 FAM214AQ32MH5 1076 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 ZNF791Q3KP31 576 aaPredicted RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 ZNF425Q6IV72 752 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 HEPHL1Q6MZM0 1159 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 FRRS1Q6ZNA5 592 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 ZNF620Q6ZNG0 422 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 NRROSQ86YC3 692 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 TMEM255BQ8WV15 326 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 SPRYD4Q8WW59 207 aaPredicted RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 FYTTD1Q96QD9 318 aaKnown RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 SECISBP2Q96T21 854 aaKnown RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 GDF15Q99988 308 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 RSPH9Q9H1X1 276 aaPredicted RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 TRIM45Q9H8W5 580 aaPredicted RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 NLGN3Q9NZ94 848 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 BOLA1Q9Y3E2 137 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 GPSM3Q9Y4H4 160 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 CSNK1G3Q9Y6M4 447 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 STON1Q9Y6Q2 735 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 GSAPA4D1B5 854 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 DUXAA6NLW8 204 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 PIP5K1CO60331 668 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 NCR1O76036 304 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 OR5F1O95221 314 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 ATP6V1E1P36543 226 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 RACK1P63244 317 aaKnown RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 INSL4Q14641 139 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 QPRTQ15274 297 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 RPE65Q16518 533 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 PUS10Q3MIT2 529 aaKnown RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 C2orf27AQ580R0 203 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 TRIM48Q8IWZ4 208 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 C19orf18Q8NEA5 215 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 OR52N1Q8NH53 320 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 DNAJA4Q8WW22 397 aaPredicted RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 CHFRQ96EP1 664 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 SENP5Q96HI0 755 aaPredicted RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 RNF170Q96K19 258 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 YIPF2Q9BWQ6 316 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 MTHFD2LQ9H903 347 aaPredicted RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 LYARQ9NX58 379 aaKnown RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 H2AFY2Q9P0M6 372 aaPredicted RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 MALT1Q9UDY8 824 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 SLC17A4Q9Y2C5 497 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 PCDHGB7Q9Y5F8 929 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 SCN2AQ99250 2005 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 PRR23AA6NEV1 266 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 AGRPO00253 132 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 CDC42EP2O14613 210 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 HMGN1P05114 100 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 MAP2K3P46734 347 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 FZD5Q13467 585 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 TRIQKQ629K1 86 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 VASNQ6EMK4 673 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 FAM111BQ6SJ93 734 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 PLET1Q6UQ28 207 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 VITQ6UXI7 678 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 CPOQ8IVL8 374 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 KCT2Q8NC54 265 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 OR2T33Q8NG76 320 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 OR7G2Q8NG99 324 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 LILRB4Q8NHJ6 448 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 UBASH3BQ8TF42 649 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 JPH3Q8WXH2 748 aaPredicted RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 C10orf90Q96M02 699 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 RMI1Q9H9A7 625 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 HINT3Q9NQE9 182 aaKnown RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 ASB6Q9NWX5 421 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 PAQR5Q9NXK6 330 aaPredicted RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 TNFRSF10DQ9UBN6 386 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 POLHQ9Y253 713 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 ZNF443Q9Y2A4 671 aaPredicted RBP14.23□□□□□ -0.13
DDX56-201ENST00000258772 NOX1Q9Y5S8 564 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 CDH10Q9Y6N8 788 aa14.23□□□□□ -0.13
DDX56-201ENST00000258772 C2orf92A0A1B0GVN3 265 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms