RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 TCRBV16S1A1N1A0A5B0 115 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 EFSO43281 561 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 ARAFP10398 606 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 PPIBP23284 216 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 RFX3P48380 749 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 CLCN2P51788 898 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 ARFIP1P53367 373 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 CDH12P55289 794 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 PCBP3P57721 371 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 FADDQ13158 208 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 DUSP8Q13202 625 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 APOFQ13790 326 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 LAIR2Q6ISS4 152 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 PAPD4Q6PIY7 484 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 GPR32P1Q8NGA4 272 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 OR9Q2Q8NGE9 314 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 KIAA1143Q96AT1 154 aaPredicted RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 FKBP10Q96AY3 582 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 CRELD1Q96HD1 420 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 GAL3ST4Q96RP7 486 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 TREX2Q9BQ50 279 aaPredicted RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 TMEM38AQ9H6F2 299 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 CPNE5Q9HCH3 593 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 EHD3Q9NZN3 535 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 BAG5Q9UL15 447 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 CLCA3PQ9Y6N3 262 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 NBEAQ8NFP9 2946 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 CENPVL1A0A0U1RR11 272 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 H3BSA7 217 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 TERTO14746 1132 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 PCDH17O14917 1159 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 DNAJB5O75953 348 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 KRT75O95678 551 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 PTNP21246 168 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 IGFBP5P24593 272 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 SHQ1Q6PI26 577 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 QSOX2Q6ZRP7 698 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 PATL1Q86TB9 770 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 TSPYL5Q86VY4 417 aaPredicted RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 OR11G2Q8NGC1 345 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 ZFP28Q8NHY6 868 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 ZNF578Q96N58 590 aaPredicted RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 RBM4BQ9BQ04 359 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 RBM4Q9BWF3 364 aaKnown RBP11.21□□□□□ -0.61
NIP7-201ENST00000254940 ADNPQ9H2P0 1102 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 NEUROD4Q9HD90 331 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 C14orf105Q9NVL8 296 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 FBXO34Q9NWN3 711 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 ETAA1Q9NY74 926 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 MAT2BQ9NZL9 334 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 FBXL4Q9UKA2 621 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 GMEB1Q9Y692 573 aa11.21□□□□□ -0.61
NIP7-201ENST00000254940 CCDC160A6NGH7 325 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 CLDN24A6NM45 220 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 M0R129 80 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 SOCS6O14544 535 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 FFAR1O14842 300 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 SLC28A2O43868 658 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 MAN1A2O60476 641 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 MATN1P21941 496 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 MPIP34949 423 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 STT3AP46977 705 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 SMN1Q16637 294 aaKnown RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 BTBD16Q32M84 506 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 CCNJQ5T5M9 372 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 REEP3Q6NUK4 255 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 NIPAL1Q6NVV3 410 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 CPEB2Q7Z5Q1 589 aaKnown RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 GALNT12Q8IXK2 581 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 ATG16L2Q8NAA4 619 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 OR52R1Q8NGF1 315 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 NMD3Q96D46 503 aaKnown RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 SENP5Q96HI0 755 aaPredicted RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 COL21A1Q96P44 957 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 LMF1Q96S06 567 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 NIPSNAP1Q9BPW8 284 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 WDR77Q9BQA1 342 aaPredicted RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 NUDT9Q9BW91 350 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 SLC26A1Q9H2B4 701 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 WDR54Q9H977 334 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 CXorf21Q9HAI6 301 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 CLK4Q9HAZ1 481 aaKnown RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 P4HTMQ9NXG6 502 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 TAS2R7Q9NYW3 318 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 LOC100130705A0A1B0GUX0 176 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 ARGFXA6NJG6 315 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 FRS3O43559 492 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 SLC35E2P0CK97 266 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 SPIBQ01892 262 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 MGAT2Q10469 447 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 MYBPC3Q14896 1274 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 ZNF630Q2M218 657 aaPredicted RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 PRICKLE4Q2TBC4 344 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 PRR22Q8IZ63 422 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 SLC2A12Q8TD20 617 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 FEVQ99581 238 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 REEP1Q9H902 201 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms