RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C6orf203Q9P0P8 240 aaPredicted RBP11.96□□□□□ -0.49
LSM8-201ENST00000249299 MYOTQ9UBF9 498 aa11.96□□□□□ -0.49
LSM8-201ENST00000249299 SEC14L3Q9UDX4 400 aa11.96□□□□□ -0.49
LSM8-201ENST00000249299 ZNF223Q9UK11 482 aaPredicted RBP11.96□□□□□ -0.49
LSM8-201ENST00000249299 DTX4Q9Y2E6 619 aa11.96□□□□□ -0.49
LSM8-201ENST00000249299 TRBV11-1A0A0K0K1C0 115 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 OR6C70A6NIJ9 312 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 NPIPB9F8W1W9 429 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 PRKD3O94806 890 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 SEMG1P04279 462 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 ALPPP05187 535 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 ITGA2P17301 1181 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 OTX2P32243 289 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 KRT20P35900 424 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 ADH7P40394 386 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 TMED10P49755 219 aaKnown RBP11.95□□□□□ -0.5
LSM8-201ENST00000249299 ATP12AP54707 1039 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 FOXL2P58012 376 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 CHRNEQ04844 493 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 CHAF1BQ13112 559 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 EFR3AQ14156 821 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 GK3PQ14409 553 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 BTBD16Q32M84 506 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 LIN52Q52LA3 116 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 EIPR1Q53HC9 387 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 RNF220Q5VTB9 566 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 H3F3CQ6NXT2 135 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 MARCH9Q86YJ5 346 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 SLC5A8Q8N695 610 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 BCORP1Q8N888 145 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 ZNF527Q8NB42 609 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 SLC22A8Q8TCC7 542 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 DOK4Q8TEW6 326 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 GEMIN6Q8WXD5 167 aaKnown RBP11.95□□□□□ -0.5
LSM8-201ENST00000249299 PIK3R3Q92569 461 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 TTC9Q92623 222 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 FGF11Q92914 225 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 FAM122AQ96E09 287 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 RNF31Q96EP0 1072 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 RMND5BQ96G75 393 aaPredicted RBP11.95□□□□□ -0.5
LSM8-201ENST00000249299 DPH1Q9BZG8 443 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 SDK2Q58EX2 2172 aa11.95□□□□□ -0.5
LSM8-201ENST00000249299 GXYLT2A0PJZ3 443 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 TMEM229AB2RXF0 380 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 HS6ST1O60243 411 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 FCMRO60667 390 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 ZNF682O95780 498 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 PABPC4LP0CB38 370 aaKnown RBP11.94□□□□□ -0.5
LSM8-201ENST00000249299 NID1P14543 1247 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 CD247P20963 164 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 ABCD3P28288 659 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 AQP1P29972 269 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 SOX11P35716 441 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 PLA2G5P39877 138 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 NR0B1P51843 470 aaKnown RBP11.94□□□□□ -0.5
LSM8-201ENST00000249299 SOX8P57073 446 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 RPS18P62269 152 aaKnown RBP11.94□□□□□ -0.5
LSM8-201ENST00000249299 FLYWCH1Q4VC44 716 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 IFI44LQ53G44 452 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 WDR53Q7Z5U6 358 aaPredicted RBP11.94□□□□□ -0.5
LSM8-201ENST00000249299 GRAMD2AQ8IUY3 354 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 TMEM102Q8N9M5 508 aaPredicted RBP11.94□□□□□ -0.5
LSM8-201ENST00000249299 OR52P1PQ8NH57 321 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
LSM8-201ENST00000249299 FBXO30Q8TB52 745 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 NR4A3Q92570 626 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 PROX1Q92786 737 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 SLC47A1Q96FL8 570 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 ZNF354BQ96LW1 612 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 CHID1Q9BWS9 393 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 UBQLN4Q9NRR5 601 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 KLHL28Q9NXS3 571 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 FBXL4Q9UKA2 621 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 SLC9A8Q9Y2E8 581 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 YARS2Q9Y2Z4 477 aaKnown RBP11.94□□□□□ -0.5
LSM8-201ENST00000249299 PTPRBP23467 1997 aa11.94□□□□□ -0.5
LSM8-201ENST00000249299 A0A1W2PQD3 144 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 TMEM200CA6NKL6 621 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 H3BNX3 289 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 TSPAN2O60636 221 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 ZIC2O95409 532 aaPredicted RBP11.93□□□□□ -0.5
LSM8-201ENST00000249299 ATP6V1G2O95670 118 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 LGI1O95970 557 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 IL7RP16871 459 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 TBXA2RP21731 343 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 RRADP55042 308 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 KCNJ10P78508 379 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 PLCXD2Q0VAA5 305 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 FOXC1Q12948 553 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 AIMP2Q13155 320 aaKnown RBP11.93□□□□□ -0.5
LSM8-201ENST00000249299 IL10RAQ13651 578 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 DUSP7Q16829 419 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 ZNF311Q5JNZ3 666 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
LSM8-201ENST00000249299 TBCELQ5QJ74 424 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 NUP54Q7Z3B4 507 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 ZNF248Q8NDW4 579 aa11.93□□□□□ -0.5
LSM8-201ENST00000249299 APOBEC4Q8WW27 367 aaKnown RBP11.93□□□□□ -0.5
LSM8-201ENST00000249299 PYDC1Q8WXC3 89 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms