RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF485Q8NCK3 441 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 OR4F15Q8NGB8 312 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 ADAMTS15Q8TE58 950 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 GANCQ8TET4 914 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 SLC35A4Q96G79 324 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 DMRTB1Q96MA1 342 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 DEPDC7Q96QD5 511 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 ACTRT3Q9BYD9 372 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 MMP28Q9H239 520 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 IL20RAQ9UHF4 553 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 K7EQS6 105 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 SURF4O15260 269 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 PIP5K1CO60331 668 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 LAMP2P13473 410 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 PTNP21246 168 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 PRKAR1BP31321 381 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 SSTR4P31391 388 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 IFNA8P32881 189 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 KIR2DL1P43626 348 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 STXBP1P61764 594 aaKnown RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 SNRPNP63162 240 aaKnown RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 RPS21P63220 83 aaKnown RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 HYAL1Q12794 435 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 TJAP1Q5JTD0 557 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 PDZK1Q5T2W1 519 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 PPP2R2DQ66LE6 453 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF425Q6IV72 752 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 NRROSQ86YC3 692 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 NRMQ8IXM6 262 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 ASCC1Q8N9N2 400 aaKnown RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 POGLUT1Q8NBL1 392 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 SLC16A11Q8NCK7 471 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 ACOT11Q8WXI4 607 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 DCLRE1CQ96SD1 692 aaKnown RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 MCHR1Q99705 422 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 C1QTNF2Q9BXJ5 285 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 ANKRD19PQ9H560 264 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 KLHL28Q9NXS3 571 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 CLCA2Q9UQC9 943 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 GSTK1Q9Y2Q3 226 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 A0A1W2PQU0 124 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 MEIOCA2RUB1 952 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 FPR3P25089 353 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 MAT2AP31153 395 aaKnown RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 ASAH1Q13510 395 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 AADACL4Q5VUY2 407 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 GDF7Q7Z4P5 450 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 OR7G2Q8NG99 324 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 TMEM255BQ8WV15 326 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 OSTF1Q92882 214 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 CDS1Q92903 461 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 COL26A1Q96A83 441 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 SLC17A9Q9BYT1 436 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 LYARQ9NX58 379 aaKnown RBP13.44□□□□□ -0.26
HIF3A-202ENST00000244303 IL20Q9NYY1 176 aa13.44□□□□□ -0.26
HIF3A-202ENST00000244303 POLR1CO15160 346 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 SLC2A10O95528 541 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 FGF9P31371 208 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 STAT5AP42229 794 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 TNFRSF4P43489 277 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 DECR1Q16698 335 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 PYDC2Q56P42 97 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 CD200R1LQ6Q8B3 271 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 FRRS1Q6ZNA5 592 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 MTSS1LQ765P7 747 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 VN1R4Q7Z5H5 301 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 GDPD1Q8N9F7 314 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 SIMC1Q8NDZ2 872 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 BBS1Q8NFJ9 593 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 OR4E2Q8NGC2 313 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 OR14C36Q8NHC7 312 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 AP3S1Q92572 193 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 RFKQ969G6 155 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 TP53INP1Q96A56 240 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 SLC41A3Q96GZ6 507 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 C10orf90Q96M02 699 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 SNX18Q96RF0 628 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 PHOX2BQ99453 314 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 MKRN2Q9H000 416 aaKnown RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 SLC22A4Q9H015 551 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 C11orf54Q9H0W9 315 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF443Q9Y2A4 671 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 CENPBD1B2RD01 187 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 BTN3A3O00478 584 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 CASKO14936 926 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF888P0CJ79 500 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 CLDN2P57739 230 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF155Q12901 538 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 CLPPQ16740 277 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-202ENST00000244303 PGGHGQ32M88 737 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 FAM214AQ32MH5 1076 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF628Q5EBL2 1059 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 HEPHL1Q6MZM0 1159 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 MFSD12Q6NUT3 480 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 GALNT12Q8IXK2 581 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 ST6GAL2Q96JF0 529 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 APOOQ9BUR5 198 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 TMED9Q9BVK6 235 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 SLC6A17Q9H1V8 727 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 TBC1D17Q9HA65 648 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms