RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 NPIPA7E9PJI5 369 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 M0R082 166 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 BCAT2O15382 392 aaPredicted RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 BRINP1O60477 761 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 OR5F1O95221 314 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 NPIPA8P0DM63 369 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 NID1P14543 1247 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 IFNA8P32881 189 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 OMPP47874 163 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 AFF3P51826 1226 aaKnown RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 BTG2P78543 158 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 CDK5Q00535 292 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 STX4Q12846 297 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ZNF155Q12901 538 aaPredicted RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 GINS1Q14691 196 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 DECR1Q16698 335 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ACSM5Q6NUN0 579 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 P2RY8Q86VZ1 359 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 OR6C4Q8NGE1 309 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 OR8J1Q8NGP2 316 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ZDHHC12Q96GR4 267 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 GUCD1Q96NT3 240 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ALOXE3Q9BYJ1 711 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 PLA2G12AQ9BZM1 189 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 KLHL3Q9UH77 587 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 MRPS33Q9Y291 106 aaKnown RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 BLACEA4D250 179 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 OR2W5A6NFC9 320 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 HRKO00198 91 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 COQ9O75208 318 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 IFNGR2P38484 337 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 EMDP50402 254 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 PSG6Q00889 435 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 TCTE1Q5JU00 501 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ZAR1Q86SH2 424 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 TCEANCQ8N8B7 351 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ADAMTS18Q8TE60 1221 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ACOT11Q8WXI4 607 aaPredicted RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 RIT1Q92963 219 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 MMABQ96EY8 250 aaPredicted RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 RBM18Q96H35 190 aaKnown RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 LMF2Q9BU23 707 aaKnown RBP17.18■□□□□ 0.34
HOXC11-201ENST00000243082 ITPAQ9BY32 194 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 PRTFDC1Q9NRG1 225 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 IRAK4Q9NWZ3 460 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 TVP23BQ9NYZ1 205 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 SIT1Q9Y3P8 196 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 KCNK2O95069 426 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 PRG2P13727 222 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 LIPAP38571 399 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 OR1D5P58170 312 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 EFNB1P98172 346 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 OCA2Q04671 838 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 TSPAN31Q12999 210 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 MRPL2Q5T653 305 aaKnown RBP17.17■□□□□ 0.34
HOXC11-201ENST00000243082 SLC25A45Q8N413 288 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 METTL27Q8N6F8 245 aaPredicted RBP17.17■□□□□ 0.34
HOXC11-201ENST00000243082 PMM1Q92871 262 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 FAM46AQ96IP4 442 aaKnown RBP17.17■□□□□ 0.34
HOXC11-201ENST00000243082 Q96MT0 163 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 CD180Q99467 661 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 CDCA4Q9BXL8 241 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 EGLN3Q9H6Z9 239 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 FOLH1BQ9HBA9 442 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 DNAJC27Q9NZQ0 273 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 CNIH4Q9P003 139 aa17.17■□□□□ 0.34
HOXC11-201ENST00000243082 A0A1B0GVT2 93 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 CDHR4A6H8M9 788 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PRKYO43930 277 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PTHP01270 115 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 ADORA3P0DMS8 318 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PIPP12273 146 aaPredicted RBP17.16■□□□□ 0.34
HOXC11-201ENST00000243082 CD36P16671 472 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 SSTR4P31391 388 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
HOXC11-201ENST00000243082 KCNAB1Q14722 419 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 OCLNQ16625 522 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 ZC3H14Q6PJT7 736 aaKnown RBP17.16■□□□□ 0.34
HOXC11-201ENST00000243082 BCDIN3DQ7Z5W3 292 aaKnown RBP17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PIGXQ8TBF5 258 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 TMEM255BQ8WV15 326 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 FGF11Q92914 225 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 POLDIP3Q9BY77 421 aaKnown RBP17.16■□□□□ 0.34
HOXC11-201ENST00000243082 DSN1Q9H410 356 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 CAPN10Q9HC96 672 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 NECTIN3Q9NQS3 549 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PRDM6Q9NQX0 595 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 POLE3Q9NRF9 147 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 IGHV1OR21-1A0A087WYE8 117 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 H3BMH7 237 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 CLDN4O14493 209 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 SLC22A1O15245 554 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 GKN3PP0CG01 181 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 GIMD1P0DJR0 217 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 MAOAP21397 527 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 HTR2AP28223 471 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PCYT1AP49585 367 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 RNF144AP50876 292 aaPredicted RBP17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PLAURQ03405 335 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms