RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GPR75O95800 540 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 IGLV3-19P01714 112 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 CPEP16870 476 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 MAP3K8P41279 467 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 CCR5P51681 352 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF136P52737 540 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 TRMT12Q53H54 448 aaKnown RBP15.08■□□□□ 0.01
UBE3D-201ENST00000237186 PAQR6Q6TCH4 344 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF836Q6ZNA1 936 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 SLC22A18ASQ8N1D0 253 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 POGLUT1Q8NBL1 392 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 GALNT6Q8NCL4 622 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 SIMC1Q8NDZ2 872 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 ANKK1Q8NFD2 765 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 OR13H1Q8NG92 308 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 STACQ99469 402 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 GSDMCQ9BYG8 508 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 CACYBPQ9HB71 228 aaKnown RBP15.08■□□□□ 0.01
UBE3D-201ENST00000237186 CPNE5Q9HCH3 593 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 NLGN3Q9NZ94 848 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 CNIH4Q9P003 139 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 CRNNQ9UBG3 495 aaPredicted RBP15.08■□□□□ 0.01
UBE3D-201ENST00000237186 MRPS2Q9Y399 296 aaKnown RBP15.08■□□□□ 0.01
UBE3D-201ENST00000237186 MTCH2Q9Y6C9 303 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 STK25O00506 426 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 IGHV4-34P06331 123 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 ETV5P41161 510 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 ETV1P50549 477 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 MGAT2Q10469 447 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 CCINQ13939 588 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 TMEM31Q5JXX7 168 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 AADACL4Q5VUY2 407 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 SLC22A16Q86VW1 577 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 ZNF619Q8N2I2 560 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 CDRT4Q8N9R6 151 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 SMRP1Q8NCR6 262 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 PATE1Q8WXA2 126 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 RNFT2Q96EX2 444 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 GPR27Q9NS67 375 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 HRASLS2Q9NWW9 162 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 KLHL3Q9UH77 587 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 CD207Q9UJ71 328 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 SSR3Q9UNL2 185 aa15.08■□□□□ 0
UBE3D-201ENST00000237186 EXOSC1Q9Y3B2 195 aaKnown RBP15.08■□□□□ 0
UBE3D-201ENST00000237186 BOLA2-SMG1P6H3BVE0 249 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 FGF17O60258 216 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 GALR3O60755 368 aaPredicted RBP15.07■□□□□ 0
UBE3D-201ENST00000237186 STX11O75558 287 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 AK1P00568 194 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 DBIP07108 87 aaKnown RBP15.07■□□□□ 0
UBE3D-201ENST00000237186 GLULP15104 373 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 MYL12AP19105 171 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 RPS19P39019 145 aaKnown RBP15.07■□□□□ 0
UBE3D-201ENST00000237186 MTNR1AP48039 350 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 WNT4P56705 351 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 MLLT1Q03111 559 aaPredicted RBP15.07■□□□□ 0
UBE3D-201ENST00000237186 DNASE1L3Q13609 305 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 TPBGQ13641 420 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 PRICKLE4Q2TBC4 344 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 NRMQ8IXM6 262 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 RNF113BQ8IZP6 322 aaKnown RBP15.07■□□□□ 0
UBE3D-201ENST00000237186 CACTIN-AS1Q8N1I8 211 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 FLCNQ8NFG4 579 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 RFKQ969G6 155 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 CTHRC1Q96CG8 243 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 CNPPD1Q9BV87 410 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 TEX12Q9BXU0 123 aa15.07■□□□□ 0
UBE3D-201ENST00000237186 CHCHD3Q9NX63 227 aaKnown RBP15.07■□□□□ 0
UBE3D-201ENST00000237186 SHISA7A6NL88 538 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 LOC110117498-PIK3R3F6TDL0 507 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 SURF4O15260 269 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 FMO6PO60774 539 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 HOXC5Q00444 222 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 DCST2Q5T1A1 773 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 STEAP3Q658P3 488 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 ZNF620Q6ZNG0 422 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 MEX3DQ86XN8 651 aaKnown RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 RBM12BQ8IXT5 1001 aaKnown RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 OR4Q3Q8NH05 313 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 PIK3R3Q92569 461 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 HOXB13Q92826 284 aaPredicted RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 TRMT61AQ96FX7 289 aaKnown RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 PRSS27Q9BQR3 290 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 EVA1AQ9H8M9 152 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 EXOSC4Q9NPD3 245 aaKnown RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 KRCC1Q9NPI7 259 aaPredicted RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 ABCB10Q9NRK6 738 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 NTNG1Q9Y2I2 539 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 PCDHGB6Q9Y5F9 930 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 CDH10Q9Y6N8 788 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 GOLGA4Q13439 2230 aaKnown RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 SLC35F4A4IF30 521 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 TBX1O43435 398 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 SOX30O94993 753 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 PVRP15151 417 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 GNSP15586 552 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 RORCP51449 518 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 MAP4K2Q12851 820 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 EIF2B5Q13144 721 aaKnown RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 MAPK14Q16539 360 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms