RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MAL2Q969L2 176 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 TSSK3Q96PN8 268 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 CD8B2A6NJW9 211 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 NEDD8-MDP1E9PL57 170 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 IMPA2O14732 288 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ITGA10O75578 1167 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 CD8BP10966 210 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 RCC1P18754 421 aaPredicted RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 TACR1P25103 407 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 MTAPQ13126 283 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 SLC25A30Q5SVS4 291 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ZNF626Q68DY1 528 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 SFRP4Q6FHJ7 346 aaPredicted RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 CFAP206Q8IYR0 622 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 HAVCR2Q8TDQ0 301 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 EEF1AKMT1Q8WVE0 214 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ZNF354BQ96LW1 612 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 FUZQ9BT04 418 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 POLR1EQ9GZS1 481 aaKnown RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 MRPS18AQ9NVS2 196 aaKnown RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 PCDHB10Q9UN67 800 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 CARNS1A5YM72 827 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 OPN1SWP03999 348 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 PRSS56P0CW18 603 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 TXNP10599 105 aaKnown RBP12.23□□□□□ -0.45
MSH2-201ENST00000233146 HLA-DPA1P20036 260 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SHC2P98077 582 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 ILF3Q12906 894 aaKnown RBP eCLIP12.23□□□□□ -0.457e-9■■■■□ 19.8
MSH2-201ENST00000233146 PPA1Q15181 289 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SYT14P1Q58G82 188 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 FAM111BQ6SJ93 734 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SLC29A4Q7RTT9 530 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 LHFPL3Q86UP9 236 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 ZNF383Q8NA42 475 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 OR1S2Q8NGQ3 325 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SLAMF9Q96A28 289 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 MARS2Q96GW9 593 aaKnown RBP12.23□□□□□ -0.45
MSH2-201ENST00000233146 TWSG1Q9GZX9 223 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 DUSP15Q9H1R2 295 aaPredicted RBP12.23□□□□□ -0.45
MSH2-201ENST00000233146 PCNTO95613 3336 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 ZSWIM8A7E2V4 1837 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 BRINP1O60477 761 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 UBL3O95164 117 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SOX14O95416 240 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 RB1P06400 928 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 LIMS3P0CW19 117 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 LIMS4P0CW20 117 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 PRPS2P11908 318 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 GNSP15586 552 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 ACHEP22303 614 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 CCR1P32246 355 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 KIR3DL1P43629 444 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 HCCSP53701 268 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 PPIAP62937 165 aaKnown RBP12.23□□□□□ -0.45
MSH2-201ENST00000233146 SKP2Q13309 424 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SLC30A8Q8IWU4 369 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 C15orf54Q8N8G6 183 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 ZSCAN1Q8NBB4 408 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 OR4L1Q8NH43 312 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 IMP4Q96G21 291 aaKnown RBP12.23□□□□□ -0.45
MSH2-201ENST00000233146 DUSP26Q9BV47 211 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SLC39A8Q9C0K1 460 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 MFFQ9GZY8 342 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 SEMA3GQ9NS98 782 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 ASB6Q9NWX5 421 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 OSER1Q9NX31 292 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 LAMP5Q9UJQ1 280 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 FZD4Q9ULV1 537 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
MSH2-201ENST00000233146 DVL2O14641 736 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 CREBL2O60519 120 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 ADAP00813 363 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 SIRPB2Q5JXA9 342 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 KIAA1161Q6NSJ0 714 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 CARFQ8N187 725 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 LINGO1Q96FE5 620 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 ZNF582Q96NG8 517 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 OR1F2PQ96R84 312 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 COPS8Q99627 209 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 GPR20Q99678 358 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 TOLLIPQ9H0E2 274 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 PRDM13Q9H4Q3 707 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 TPT1P8Q9HAU6 139 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 C1GALT1Q9NS00 363 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 TAS2R5Q9NYW4 299 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 RASD1Q9Y272 281 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 SNRPGP15A8MWD9 76 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 CACNB4O00305 520 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 MANBAO00462 879 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 ARPC1BO15143 372 aaKnown RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 TLX2O43763 284 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 B4GALT3O60512 393 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 RPP40O75818 363 aaKnown RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 LRATO95237 230 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 ZNF35P13682 527 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 BDKRB2P30411 391 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 SDHAP31040 664 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms