RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 BTNL2Q9UIR0 455 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 F5H5P2 479 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 KIAA0355O15063 1070 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 SEC14L5O43304 696 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 SMAD6O43541 496 aaKnown RBP12.65□□□□□ -0.38
NEK4-201ENST00000233027 KNG1P01042 644 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 ALDOCP09972 364 aaKnown RBP12.65□□□□□ -0.38
NEK4-201ENST00000233027 ZNF35P13682 527 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 FASLGP48023 281 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 PER3P56645 1201 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEK4-201ENST00000233027 PRR22Q8IZ63 422 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 TOR1AIP2Q8NFQ8 470 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 OR2T4Q8NH00 348 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 DCUN1D4Q92564 292 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 CHFRQ96EP1 664 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 BCL7BQ9BQE9 202 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
NEK4-201ENST00000233027 PRDM9Q9NQV7 894 aa12.65□□□□□ -0.38
NEK4-201ENST00000233027 TP53I11O14683 189 aa12.65□□□□□ -0.39
NEK4-201ENST00000233027 MT-ND4P03905 459 aa12.65□□□□□ -0.39
NEK4-201ENST00000233027 ZNF865P0CJ78 1059 aaPredicted RBP12.65□□□□□ -0.39
NEK4-201ENST00000233027 CFL1P23528 166 aaKnown RBP12.65□□□□□ -0.39
NEK4-201ENST00000233027 RSU1Q15404 277 aa12.65□□□□□ -0.39
NEK4-201ENST00000233027 KCTD20Q7Z5Y7 419 aa12.65□□□□□ -0.39
NEK4-201ENST00000233027 TMEM150AQ86TG1 271 aa12.65□□□□□ -0.39
NEK4-201ENST00000233027 FIBINQ8TAL6 211 aa12.65□□□□□ -0.39
NEK4-201ENST00000233027 LSM5Q9Y4Y9 91 aaKnown RBP12.65□□□□□ -0.39
NEK4-201ENST00000233027 CCDC88AQ3V6T2 1871 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 AK1P00568 194 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 SYNPRQ8TBG9 265 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 CRYGNQ8WXF5 182 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 CDC6Q99741 560 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 THAP7Q9BT49 309 aaPredicted RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 PELI2Q9HAT8 420 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 TREX1Q9NSU2 369 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 APOBEC3BQ9UH17 382 aaKnown RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 ARHGEF15O94989 841 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 GYPBP06028 91 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 FXYD4P59646 89 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 CLLU1OSQ5K130 101 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 CTSL3PQ5NE16 218 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 ZNF619Q8N2I2 560 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 GTPBP8Q8N3Z3 284 aaPredicted RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 DDX31Q9H8H2 851 aaKnown RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 IL37Q9NZH6 218 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 GMPR2Q9P2T1 348 aaKnown RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 GLS2Q9UI32 602 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 PCDHA9Q9Y5H5 950 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 RNF215Q9Y6U7 377 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 LOC285095A0A1B0GVY8 99 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 ARPC1BO15143 372 aaKnown RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 ZNF623O75123 536 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 SC5DO75845 299 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 LIPCP11150 499 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 C21orf33P30042 268 aaPredicted RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 RORAP35398 523 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 PFDN5Q99471 154 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 PHYHO14832 338 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 SLC22A5O76082 557 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 ITGAMP11215 1152 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 INHBCP55103 352 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 P2RY14Q15391 338 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 SMN1Q16637 294 aaKnown RBP12.64□□□□□ -0.39
NEK4-201ENST00000233027 HSD11B1LQ7Z5J1 315 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 PARP16Q8N5Y8 322 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 CDS1Q92903 461 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 ZDHHC7Q9NXF8 308 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 ANKMY1Q9P2S6 941 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 IER3IP1Q9Y5U9 82 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 NUBP2Q9Y5Y2 271 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 IRS2Q9Y4H2 1338 aa12.64□□□□□ -0.39
NEK4-201ENST00000233027 DCDC2BA2VCK2 349 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 VSTM2BA6NLU5 285 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 F8W036 122 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 SDC3O75056 442 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 DDCP20711 480 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 BLOC1S1P78537 153 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 GRM7Q14831 915 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 SERPINA11Q86U17 422 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 NLGN4YQ8NFZ3 816 aaPredicted RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 OR51T1Q8NGJ9 327 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 MS4A4EQ96PG1 132 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 LINC00597Q9H2U6 94 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 LOC105369274A0A096LPK9 316 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 SYT7O43581 403 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 ZNF140P52738 457 aaPredicted RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 CSNK2A1P68400 391 aaPredicted RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 NTHL1P78549 312 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 DLX2Q07687 328 aaPredicted RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 IL20RBQ6UXL0 311 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 Q6ZPB1 254 aaPredicted RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 OR4N4Q8N0Y3 316 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 CSNK2A3Q8NEV1 391 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 PINK1Q9BXM7 581 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 MYH1P12882 1939 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 LATS1O95835 1130 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 IFNGR1P15260 489 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 UGT2B7P16662 529 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms