RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CHI3L2Q15782 390 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 GRAMD1BQ3KR37 738 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 VPS26BQ4G0F5 336 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 C6orf136Q5SQH8 315 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 CEP85LQ5SZL2 805 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 ARSKQ6UWY0 536 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 LRIG3Q6UXM1 1119 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 TMEM200AQ86VY9 491 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 HOMEZQ8IX15 550 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 KRTCAP2Q8N6L1 136 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 FADS6Q8N9I5 356 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 CDRT4Q8N9R6 151 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 OR5M1Q8NGP8 315 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 CEP70Q8NHQ1 597 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 ZPLD1Q8TCW7 415 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 DUSP19Q8WTR2 217 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 TUBGCP3Q96CW5 907 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 DTNBP1Q96EV8 351 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 GIMAP5Q96F15 307 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 CHMP6Q96FZ7 201 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 MS4A4EQ96PG1 132 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 TBL1XR1Q9BZK7 514 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 SDHAF3Q9NRP4 125 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 FAM120CQ9NX05 1096 aaKnown RBP12.9□□□□□ -0.34
GPN3-201ENST00000228827 RAB21Q9UL25 225 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 L3MBTL1Q9Y468 752 aa12.9□□□□□ -0.34
GPN3-201ENST00000228827 DCHS2Q6V1P9 2916 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 A0A1W2PRB8 838 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 MBD3L4A6NDZ8 208 aaPredicted RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 MBD3L3A6NE82 208 aaPredicted RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 MBD3L5A6NJ08 208 aaPredicted RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 CLCA1A8K7I4 914 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 ESPNB1AK53 854 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 EEF1E1-BLOC1S5C9J1V9 151 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 EEF1E1O43324 174 aaKnown RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 NKX2-2O95096 273 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 LAMP1P11279 417 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 ASCL1P50553 236 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 PDCD2Q16342 344 aaPredicted RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 RAET1LQ5VY80 246 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 MFSD12Q6NUT3 480 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 FIGNL1Q6PIW4 674 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 POMZP3Q6PJE2 187 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 ZZZ3Q8IYH5 903 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 SLC16A11Q8NCK7 471 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 MBD3L2Q8NHZ7 208 aaPredicted RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 JADE3Q92613 823 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 G6PC3Q9BUM1 346 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 KCNK9Q9NPC2 374 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 ZCCHC3Q9NUD5 404 aaKnown RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 ZNF629Q9UEG4 869 aaPredicted RBP12.89□□□□□ -0.35
GPN3-201ENST00000228827 KCNN3Q9UGI6 736 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 SNX8Q9Y5X2 465 aa12.89□□□□□ -0.35
GPN3-201ENST00000228827 PCNX1Q96RV3 2341 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 TTC36A6NLP5 189 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 ANGPTL1O95841 491 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 SERPINE1P05121 402 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 TMIGD3P0DMS9 266 aaPredicted RBP12.88□□□□□ -0.35
GPN3-201ENST00000228827 DDX5P17844 614 aaKnown RBP12.88□□□□□ -0.35
GPN3-201ENST00000228827 CHMP24386 653 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 CTSSP25774 331 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 RPL3P39023 403 aaKnown RBP12.88□□□□□ -0.35
GPN3-201ENST00000228827 MAP3K8P41279 467 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 CLDN18P56856 261 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 DUSP5Q16690 384 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 CPTPQ5TA50 214 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 APOOLQ6UXV4 268 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 ZAR1Q86SH2 424 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 GCNT2Q8N0V5 402 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 ZNF781Q8N8C0 355 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 GATSQ8NAP1 163 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
GPN3-201ENST00000228827 SH3GL2Q99962 352 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 PTGES2Q9H7Z7 377 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 SIRT3Q9NTG7 399 aaPredicted RBP12.88□□□□□ -0.35
GPN3-201ENST00000228827 NTMQ9P121 344 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 EIF3LQ9Y262 564 aaKnown RBP12.88□□□□□ -0.35
GPN3-201ENST00000228827 MRPS18CQ9Y3D5 142 aaKnown RBP12.88□□□□□ -0.35
GPN3-201ENST00000228827 EXPH5Q8NEV8 1989 aa12.88□□□□□ -0.35
GPN3-201ENST00000228827 NINQ8N4C6 2090 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 MYO9AB2RTY4 2548 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 SHISA8B8ZZ34 492 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 SYT5O00445 386 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 KCNK2O95069 426 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 ZWINTO95229 277 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 C6orf47O95873 294 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 ALOX5P09917 674 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 G6PDP11413 515 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 ZNF708P17019 499 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 POU3F2P20265 443 aaPredicted RBP12.87□□□□□ -0.35
GPN3-201ENST00000228827 CAPN3P20807 821 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 BGNP21810 368 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 KIR2DL3P43628 341 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 ABCE1P61221 599 aaKnown RBP12.87□□□□□ -0.35
GPN3-201ENST00000228827 PRR5P85299 388 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms