RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TOMM40LQ969M1 308 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 MAGIXQ9H6Y5 334 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 NSG1A0A0A6YYJ2 146 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 PRSS38A1L453 326 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 H0YAE9 185 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 RFPL1O75677 317 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 HPRP00739 348 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 CD46P15529 392 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF45Q02386 682 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 ERVK13-1Q9NX77 482 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 CDC14CA4D256 554 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 RAB3AP20336 220 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 RAB4AP20338 218 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ITGB8P26012 769 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 PTH2RP49190 550 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 CLDN8P56748 225 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 FAM118AQ9NWS6 357 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 POLHQ9Y253 713 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 RHBDD3Q9Y3P4 386 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 SOBPA7XYQ1 873 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 LILRB3O75022 631 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 DBHP09172 617 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF136P52737 540 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 RRAS2P62070 204 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 RAB31Q13636 194 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 OR52E1Q8NGJ3 308 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 EMC3Q9P0I2 261 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 PCTPQ9UKL6 214 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 TP53TG5Q9Y2B4 290 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 SLC35E2BP0CK96 405 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 TDGQ13569 410 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 TANKQ92844 425 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 MAELQ96JY0 434 aaKnown RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 OR4K3Q96R72 315 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 OR6C6A6NF89 314 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 LILRB5O75023 590 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ITGB7P26010 798 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 MAP2K3P46734 347 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ARSDP51689 593 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 DEFB103AP81534 67 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 RNASE10Q5GAN6 216 aaKnown RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 SFRP4Q6FHJ7 346 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM150AQ86TG1 271 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 MCATQ8IVS2 390 aaKnown RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 RLN3Q8WXF3 142 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 MACROD1Q9BQ69 325 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 SORBS1Q9BX66 1292 aaKnown RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 PLEK2Q9NYT0 353 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 LRIT1Q9P2V4 623 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ATPIF1Q9UII2 106 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 A0A0U1RQS6 177 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 LOC102725191A0A1B0GVB3 256 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 MT-CO2P00403 227 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 OR8U9P0C7N5 309 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 DLSTP36957 453 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 NR4A2P43354 598 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 WDR5P61964 334 aaKnown RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 PTPRRQ15256 657 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ESCO2Q56NI9 601 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 MOB3CQ70IA8 216 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ASRGL1Q7L266 308 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 OR5L1Q8NGL2 311 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 CDS1Q92903 461 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ISOC1Q96CN7 298 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 TCEAL4Q96EI5 215 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 HEBP1Q9NRV9 189 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 LRFN1Q9P244 771 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 NPIPB15A6NHN6 443 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF623O75123 536 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 ERV3-1Q14264 604 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 LRRC18Q8N456 261 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 SDR9C7Q8NEX9 313 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM246Q9BRR3 403 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 MKS1Q9NXB0 559 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 GPR83Q9NYM4 423 aa12.51□□□□□ -0.41
COL1A1-201ENST00000225964 STK17BO94768 372 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 IL4RP24394 825 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 SCGB2A2Q13296 93 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MOGQ16653 247 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 NKPD1Q17RQ9 610 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF791Q3KP31 576 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 BPHLQ86WA6 291 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MARVELD2Q8N4S9 558 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 TSPEARQ8WU66 669 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 TWSG1Q9GZX9 223 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MMP27Q9H306 513 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 POT1Q9NUX5 634 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM100Q9NV29 134 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 USP36Q9P275 1121 aaKnown RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 GPR160Q9UJ42 338 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CARD8Q9Y2G2 431 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 ENTPD2Q9Y5L3 495 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 NFAT5O94916 1531 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms