RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 OR6C4Q8NGE1 309 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 RAD51AP1Q96B01 352 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 NACC2Q96BF6 587 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ARSGQ96EG1 525 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 CNRIP1Q96F85 164 aaPredicted RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 HYLS1Q96M11 299 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 FCRL4Q96PJ5 515 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 DHRS9Q9BPW9 319 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 MENTQ9BUN1 341 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 GHITMQ9H3K2 345 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 C6orf106Q9H6K1 298 aaPredicted RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 SYNPO2LQ9H987 977 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 BCL2L10Q9HD36 194 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 SLC35C2Q9NQQ7 365 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ENAMQ9NRM1 1142 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 CYSLTR2Q9NS75 346 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ACSS1Q9NUB1 689 aaPredicted RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 PTGFRNQ9P2B2 879 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 RASD1Q9Y272 281 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 U3KQ87 197 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 LOC105369274A0A096LPK9 316 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 A0A0A6YYD5 115 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 A0A0B4J203 849 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 SNTNA6NMZ2 147 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 RNF13O43567 381 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 LILRB3O75022 631 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 SLC22A5O76082 557 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 INHAP05111 366 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 C6P13671 934 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 RNF144AP50876 292 aaPredicted RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 SLC25A35Q3KQZ1 300 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 MZT2AQ6P582 158 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 OR4N4Q8N0Y3 316 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 OR8H3Q8N146 312 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ZNF680Q8NEM1 530 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 BEST4Q8NFU0 473 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ZNF431Q8TF32 576 aaPredicted RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 RGMAQ96B86 450 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 NUS1Q96E22 293 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 GPR137Q96N19 417 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 COQ7Q99807 217 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 AIF1LQ9BQI0 150 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 SLC38A1Q9H2H9 487 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 EVA1BQ9NVM1 165 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 UCKL1Q9NWZ5 548 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ZNF222Q9UK12 451 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ELF5Q9UKW6 265 aaPredicted RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 EXOGQ9Y2C4 368 aaKnown RBP11.6□□□□□ -0.55
NUP88-201ENST00000225696 ATG4BQ9Y4P1 393 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 IRAK3Q9Y616 596 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 NOTCH4Q99466 2003 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 A0A1W2PR48 441 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 J3QRE1 110 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 MAN2B1O00754 1011 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 HYAL3O43820 417 aaPredicted RBP11.59□□□□□ -0.55
NUP88-201ENST00000225696 RFPL3O75679 317 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SSTR2P30874 369 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 TAS2R38P59533 333 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 DEFB103AP81534 67 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 E2F1Q01094 437 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 POU4F3Q15319 338 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SLC36A2Q495M3 483 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 C18orf63Q68DL7 685 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 OR4C11Q6IEV9 310 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 PLBD1Q6P4A8 553 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 ADCK2Q7Z695 626 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SYT9Q86SS6 491 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SFTPA1Q8IWL2 248 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 NRSN1Q8IZ57 195 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
NUP88-201ENST00000225696 OR5M3Q8NGP4 307 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 OR8K5Q8NH50 307 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 BBS10Q8TAM1 723 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 RFT1Q96AA3 541 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 ARRDC3Q96B67 414 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SAMD8Q96LT4 415 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 ZSWIM3Q96MP5 696 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 TRAF4Q9BUZ4 470 aaPredicted RBP11.59□□□□□ -0.55
NUP88-201ENST00000225696 LGR4Q9BXB1 951 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 MED28Q9H204 178 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 DPEP2Q9H4A9 486 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 OSGEPL1Q9H4B0 414 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 XKR8Q9H6D3 395 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 ZDHHC4Q9NPG8 344 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 IL20Q9NYY1 176 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 TNFRSF10DQ9UBN6 386 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SRRDQ9UH36 339 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 POLHQ9Y253 713 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 DOCK9Q9BZ29 2069 aa11.59□□□□□ -0.55
NUP88-201ENST00000225696 SNRNP200O75643 2136 aaKnown RBP11.59□□□□□ -0.55
NUP88-201ENST00000225696 IRGMA1A4Y4 181 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 MOSPD3O75425 235 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 FGBP02675 491 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 CXCL10P02778 98 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 CD3GP09693 182 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 ZGLP1P0C6A0 271 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 KELP23276 732 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 AHCYP23526 432 aa11.58□□□□□ -0.56
NUP88-201ENST00000225696 PTBP1P26599 531 aaKnown RBP eCLIP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms