RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 EXTL2Q9UBQ6 330 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 TMPRSS11EQ9UL52 423 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 ENPP4Q9Y6X5 453 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 TRPM3Q9HCF6 1732 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-201ENST00000223398 RNASET2O00584 256 aaKnown RBP17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ITIH1P19827 911 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ADRA1AP35348 466 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 FRKP42685 505 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ACBD7Q8N6N7 88 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 OR10A4Q9H209 315 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 CD93Q9NPY3 652 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF224Q9NZL3 707 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 OR1D5P58170 312 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 POU4F2Q12837 409 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 FOXN4Q96NZ1 517 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-201ENST00000223398 H0Y8X5 98 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ARHGEF15O94989 841 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 CPMP14384 443 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF534Q76KX8 674 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ELSPBP1Q96BH3 223 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 HDHD5Q9BXW7 423 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 HDAC8Q9BY41 377 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ARNT2Q9HBZ2 717 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 ERCC1P07992 297 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-201ENST00000223398 HMGA1P17096 107 aaKnown RBP17.38■□□□□ 0.37
CLIP2-201ENST00000223398 TAP2Q03519 686 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 FAM205BPQ63HN1 556 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 POGLUT1Q8NBL1 392 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 OR9K2Q8NGE7 335 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 HDAC2Q92769 488 aaKnown RBP17.38■□□□□ 0.37
CLIP2-201ENST00000223398 NMNAT1Q9HAN9 279 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-201ENST00000223398 GPR83Q9NYM4 423 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 BTNL2Q9UIR0 455 aa17.38■□□□□ 0.37
CLIP2-201ENST00000223398 E2F3O00716 465 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 GTF2F2P13984 249 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 CD46P15529 392 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 APLNRP35414 380 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 SLC6A8P48029 635 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 TPTEP56180 551 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 EIF2B1Q14232 305 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF404Q494X3 552 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 FAM71F1Q96KD3 344 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 PCDHA9Q9Y5H5 950 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 TAF1P21675 1872 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 NDUFB2O95178 105 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 TMEM225BP0DP42 221 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 GSTM2P28161 218 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 CNR2P34972 360 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ACTA2P62736 377 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ACTG2P63267 376 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 SQSTM1Q13501 440 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 RSU1Q15404 277 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 C6orf141Q5SZD1 244 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF367Q7RTV3 350 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ZBTB8BQ8NAP8 495 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ZMYND19Q96E35 227 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 URM1Q9BTM9 101 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 NTMT1Q9BV86 223 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 MYNNQ9NPC7 610 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 SCP2D1Q9UJQ7 156 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 IER3IP1Q9Y5U9 82 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 MT-ND2P03891 347 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 MMP12P39900 470 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF829Q3KNS6 432 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 PDXPQ96GD0 296 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 FGF21Q9NSA1 209 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 TRAV6A0A075B6T7 132 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF850A8MQ14 1090 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 SLC33A1O00400 549 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 PABPC4LP0CB38 370 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 THBS2P35442 1172 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 RBM34P42696 430 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 CD97P48960 835 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 RACK1P63244 317 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 E2F1Q01094 437 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 PYHIN1Q6K0P9 492 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 C12orf43Q96C57 262 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 SLC30A2Q9BRI3 323 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF700Q9H0M5 742 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 MYH9P35579 1960 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 SEMA3DO95025 777 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 GPR75O95800 540 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 FGF4P08620 206 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 PNMTP11086 282 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ATXN7L3Q14CW9 347 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 FRS2Q8WU20 508 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 MAGIXQ9H6Y5 334 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 SDR39U1Q9NRG7 319 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-201ENST00000223398 ICKQ9UPZ9 632 aa17.37■□□□□ 0.37
CLIP2-201ENST00000223398 NUMA1Q14980 2115 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 GCH1P30793 250 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MAGEA2P43356 314 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 CCL11P51671 97 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 CD83Q01151 205 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 TMEM69Q5SWH9 247 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 HACD2Q6Y1H2 254 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF584Q8IVC4 421 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms