RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 SNTA1Q13424 505 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 EIF2S3LQ2VIR3 472 aaKnown RBP13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 CMPK2Q5EBM0 449 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 SAXO2Q658L1 398 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 SLC30A6Q6NXT4 461 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 TNFAIP8L2Q6P589 184 aaPredicted RBP13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 MSANTD1Q6ZTZ1 278 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 PRR7Q8TB68 274 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 PNPT1Q8TCS8 783 aaKnown RBP13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 SPDL1Q96EA4 605 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 NEURL3Q96EH8 262 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 GNRHR2Q96P88 292 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 OR51I1Q9H343 314 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 ZNF385DQ9H6B1 395 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 SLC6A13Q9NSD5 602 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 FBXO34Q9NWN3 711 aa13.44□□□□□ -0.26
PCOLCE-201ENST00000223061 SHANK1Q9Y566 2161 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 CELA3AP09093 270 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 CAPN3P20807 821 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 GRAMD1BQ3KR37 738 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 GTDC1Q4AE62 458 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 KRTCAP3Q53RY4 240 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 METTL21CQ5VZV1 264 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 TMEM81Q6P7N7 255 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 RNF130Q86XS8 419 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 FAM109AQ8N4B1 249 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 FAM110BQ8TC76 370 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 TMEM41AQ96HV5 264 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 ZNF703Q9H7S9 590 aaPredicted RBP13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 GIN1Q9NXP7 522 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 B4GALT7Q9UBV7 327 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 OSGIN2Q9Y236 505 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 PCDHGB3Q9Y5G1 929 aa13.43□□□□□ -0.26
PCOLCE-201ENST00000223061 CFAP73A6NFT4 308 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 C17orf51A8MQB3 221 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 ATP6V1C1P21283 382 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 GDF1P27539 372 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 KCNC4Q03721 635 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 BNIP1Q12981 228 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 STX5Q13190 355 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 TOMM20Q15388 145 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 HYAL4Q2M3T9 481 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 DCST2Q5T1A1 773 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 FNDC7Q5VTL7 733 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 TIGD3Q6B0B8 471 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 OR5M10Q6IEU7 315 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 GHDCQ8N2G8 530 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 OR1J4Q8NGS1 313 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 GTF2H4Q92759 462 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 RAB8BQ92930 207 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 G6PC3Q9BUM1 346 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 ZDHHC11Q9H8X9 412 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 C15orf41Q9Y2V0 281 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 HRH3Q9Y5N1 445 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 WIF1Q9Y5W5 379 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 GCN1Q92616 2671 aaKnown RBP13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 RELNP78509 3460 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 FASNP49327 2511 aaKnown RBP13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 HELZ2Q9BYK8 2649 aaKnown RBP13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 DUXAA6NLW8 204 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 SNPHO15079 494 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 FADS1O60427 444 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 TRAPPC6AO75865 159 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 DCTN3O75935 186 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 TRPC1P48995 793 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 CLK3P49761 638 aaKnown RBP13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 KHKP50053 298 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 BNC2Q6ZN30 1099 aaPredicted RBP13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 MARCH3Q86UD3 253 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 OR4C3Q8NH37 302 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 MIPOL1Q8TD10 442 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 RNF138Q8WVD3 245 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 C10orf82Q8WW14 230 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 XAGE5Q8WWM1 108 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 NTNG2Q96CW9 530 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 AURKBQ96GD4 344 aaPredicted RBP13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 TBL1XR1Q9BZK7 514 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 TMEM45AQ9NWC5 275 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 ABCG2Q9UNQ0 655 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 LIPGQ9Y5X9 500 aa13.42□□□□□ -0.26
PCOLCE-201ENST00000223061 MYO18BQ8IUG5 2567 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 RP1L1Q8IWN7 2480 aaPredicted RBP13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 A0A1B0GTH9 108 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 UBOX5O94941 541 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 SOX30O94993 753 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 KRT75O95678 551 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 ELAVL4P26378 380 aaKnown RBP13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 GAS1P54826 345 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 RBPJQ06330 500 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 UBAP2LQ14157 1087 aaKnown RBP13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 SLC10A1Q14973 349 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 COX20Q5RI15 118 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 OLIG3Q7RTU3 272 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 C16orf62Q7Z3J2 963 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 FITM2Q8N6M3 262 aa13.41□□□□□ -0.26
PCOLCE-201ENST00000223061 WDSUB1Q8N9V3 476 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms