RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 EPHA5P54756 1037 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 RAB40BQ12829 278 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 MLLT11Q13015 90 aaPredicted RBP11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ALG10BQ5I7T1 473 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ZER1Q7Z7L7 766 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC44A3Q8N4M1 653 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 AMER3Q8N944 861 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC25A36Q96CQ1 311 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ITPKCQ96DU7 683 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ELP4Q96EB1 424 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 LRRC3BQ96PB8 259 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 MKRN2Q9H000 416 aaKnown RBP11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 MRTO4Q9UKD2 239 aaKnown RBP11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ZSWIM8A7E2V4 1837 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CACNA1IQ9P0X4 2223 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 SGK494L7N484 410 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 MOSPD3O75425 235 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 TCEA1P23193 301 aaKnown RBP11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 S100A1P23297 94 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 PPP3R1P63098 170 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 HHEXQ03014 270 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 EIF2B5Q13144 721 aaKnown RBP11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC48A1Q6P1K1 146 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 PARM1Q6UWI2 310 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 LAX1Q8IWV1 398 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 POMGNT2Q8NAT1 580 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 ZNF248Q8NDW4 579 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 OR4K13Q8NH42 304 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 TMEM163Q8TC26 289 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 LMX1AQ8TE12 382 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 MMP28Q9H239 520 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 PRTFDC1Q9NRG1 225 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 TBC1D29Q9UFV1 150 aa11.58□□□□□ -0.55
TM9SF4-201ENST00000217315 PCNTO95613 3336 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 A0A1W2PQ09 198 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 CSO75390 466 aaKnown RBP11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SEMA4FO95754 770 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 GYPBP06028 91 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 NR4A2P43354 598 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 TSPAN31Q12999 210 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 GBX1Q14549 363 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 KIR2DS3Q14952 304 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 OXA1LQ15070 435 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 ACSM5Q6NUN0 579 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SYCE2Q6PIF2 218 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 FBXL6Q8N531 539 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 CDRT4Q8N9R6 151 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 TMEM239Q8WW34 195 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SPRYD4Q8WW59 207 aaPredicted RBP11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SLAMF7Q9NQ25 335 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 ENAMQ9NRM1 1142 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SERGEFQ9UGK8 458 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 A0A087WUU8 490 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 TSPAN11A1L157 253 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 TRIM64CA6NLI5 447 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 NPC1O15118 1278 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SCG5P05408 212 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 F3P13726 295 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 UGT2B10P36537 528 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 MAP2K3P46734 347 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SEC23BQ15437 767 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 ODF4Q2M2E3 257 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 RBM12BQ8IXT5 1001 aaKnown RBP11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 CADM3Q8N126 398 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 OR52E2Q8NGJ4 325 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 SFXN5Q8TD22 340 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 PIGKQ92643 395 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 ARSGQ96EG1 525 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 ZNF582Q96NG8 517 aaPredicted RBP11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 POLDIP3Q9BY77 421 aaKnown RBP11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 OR52D1Q9H346 318 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 NLKQ9UBE8 527 aa11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 TMA7Q9Y2S6 64 aaKnown RBP11.58□□□□□ -0.56
TM9SF4-201ENST00000217315 ANKRD33BA6NCL7 494 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 SLC22A31A6NKX4 558 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 KHNYNO15037 678 aaKnown RBP11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 PCMT1P22061 227 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 PKLRP30613 574 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 EIF2DP41214 584 aaKnown RBP11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 PDX1P52945 283 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 NDUFA5Q16718 116 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 ARTNQ5T4W7 220 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 LINGO2Q7L985 606 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 NRARPQ7Z6K4 114 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 LYSMD2Q8IV50 215 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 RPLP0P6Q8NHW5 317 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 OR1E3Q8WZA6 343 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 ITFG2Q969R8 447 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 APOBEC3BQ9UH17 382 aaKnown RBP11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 NAALAD2Q9Y3Q0 740 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 PCDHGB7Q9Y5F8 929 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 A0A1B0GVC2 190 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 A6NIN4 97 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 H0YGG7 62 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 NRG2O14511 850 aaPredicted RBP11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 FCMRO60667 390 aa11.57□□□□□ -0.56
TM9SF4-201ENST00000217315 CHRM4P08173 479 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms