RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DLX2Q07687 328 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 MGAT3Q09327 533 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 LTC4SQ16873 150 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CHDHQ8NE62 594 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 OR4F15Q8NGB8 312 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 SYNPRQ8TBG9 265 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CREBL2O60519 120 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 BCAS1O75363 584 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 DCNP07585 359 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 BMP4P12644 408 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CHMP24386 653 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CAMLGP49069 296 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 PPP5CP53041 499 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 PDSS1Q5T2R2 415 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 B3GNT8Q7Z7M8 397 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 C4orf36Q96KX1 117 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 ANKMY1Q9P2S6 941 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 H3BQ06 376 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CASC3O15234 703 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 OXSR1O95747 527 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 PIM1P11309 404 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 LUMP51884 338 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 CTSL3PQ5NE16 218 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 LCN8Q6JVE9 175 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM68Q96MH6 324 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF559Q9BR84 538 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 TXLNGYQ9BZA5 131 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 PRODH2Q9UF12 536 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 RGPD5Q99666 1765 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 FUOMA2VDF0 154 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 EPOP01588 193 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC10A3P09131 477 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 KCTD18Q6PI47 426 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 TMPPEQ6ZT21 453 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 TCEAL3Q969E4 200 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 ALOXE3Q9BYJ1 711 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 Q9Y3F1 56 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 A6NCN8 305 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 THEGLP0DJG4 465 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 RAB6AP20340 208 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 GPX3P22352 226 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 P2RY2P41231 377 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 OR8J1Q8NGP2 316 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 TEX10Q9NXF1 929 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 SYT7O43581 403 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 TFP02787 698 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 IFNGR1P15260 489 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 CTSCP53634 463 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 STK35Q8TDR2 534 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 UTP4Q969X6 686 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 SLAMF9Q96A28 289 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 MPIG6BO95866 241 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 ERCC1P07992 297 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 SDC1P18827 310 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 DCTP40126 519 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 FADDQ13158 208 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 R3HDMLQ9H3Y0 253 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 ACKR4Q9NPB9 350 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 KCNIP3Q9Y2W7 256 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 RGS6P49758 472 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 CXCR4P61073 352 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 RUNX3Q13761 415 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 OR2B2Q9GZK3 357 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 IL37Q9NZH6 218 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 ARPC1BO15143 372 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 DNAJB1P25685 340 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 DEFB103AP81534 67 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 OR7G3Q8NG95 312 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 OR5H2Q8NGV7 314 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 CPT1CQ8TCG5 803 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 KCNN1Q92952 543 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 HHIPL1Q96JK4 782 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC2A4RGQ9NR83 387 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 THSD1Q9NS62 852 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 RIMS3Q9UJD0 308 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 CNMDO75829 334 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 OSMP13725 252 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 TGM4P49221 684 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF33AQ06730 810 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC18B1Q6NT16 456 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 OR52R1Q8NGF1 315 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM234Q8WY98 164 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 ACTRT3Q9BYD9 372 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM181Q9P2C4 612 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 INTS6Q9UL03 887 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 AP1M2Q9Y6Q5 423 aa12.85□□□□□ -0.35
TGFBR3-201ENST00000212355 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 VSTM2BA6NLU5 285 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms