RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Mospd2Q9CWP6 518 aa8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mrpl19Q9D338 292 aaKnown RBP8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Borcs5Q9D920 195 aa8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tcf23Q9JLR5 209 aa8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Jag2Q9QYE5 1247 aa8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Dctn6Q9WUB4 190 aa8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mapk11Q9WUI1 364 aa8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fads2Q9Z0R9 444 aaKnown RBP8.13□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kbtbd7G5E8C2 690 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn1r175K7N6T9 304 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 RpsaP14206 295 aaKnown RBP8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Hsd3b1P24815 373 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ckmt1P30275 418 aaKnown RBP8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Lpar5Q149R9 372 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nell1Q2VWQ2 810 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Clhc1Q5M6W3 596 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kcnh1Q60603 989 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Abcg1Q64343 666 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ubash3bQ8BGG7 638 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Piwil2Q8CDG1 971 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gulp1Q8K2A1 304 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Prokr2Q8K458 381 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn1r198Q8R263 300 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn1r24Q8R2D6 296 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1312Q8VF10 317 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr691Q8VGW5 322 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cbr4Q91VT4 236 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ash2lQ91X20 623 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tada1Q99LM9 335 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Prdm5Q9CXE0 599 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kti12Q9D1R2 351 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fer1l4A3KGK3 1992 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Trbv21A0A0A6YX06 97 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm6592A2AHC7 168 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rad21l1A2AU37 552 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Esp31A8R0W3 114 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn2r56E9Q4U5 779 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 5830473C10RikF8VQ07 620 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn1r25H3BLP0 302 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Map2k3O09110 347 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 P03987 398 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 OtcP11725 354 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nudt19P11930 357 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 H2-D1P14427 368 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Zfp37P17141 594 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gabrg3P27681 467 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nat1P50294 290 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Srsf6Q3TWW8 339 aaKnown RBP8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm10644Q3TZG3 87 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Trim40Q3UWA4 246 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Wfdc5Q4KXB6 126 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pdp2Q504M2 532 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tab3Q571K4 716 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cd55Q61475 390 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 ZpbpQ62522 350 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mfsd4aQ6PDC8 510 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1318Q7TQW6 320 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1045Q7TR80 315 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pum2Q80U58 1066 aaKnown RBP8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ntf4Q80VU4 209 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cpeb2Q812E0 521 aaKnown RBP8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 NapepldQ8BH82 396 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 CtsoQ8BM88 312 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vps9d1Q8C190 649 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 EndovQ8C9A2 338 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cdc73Q8JZM7 531 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cnot3Q8K0V4 751 aaKnown RBP8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Lgi4Q8K1S1 537 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 CipcQ8R0W1 432 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 BphlQ8R164 291 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 SdslQ8R238 329 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Neto1Q8R4I7 533 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Akr1d1Q8VCX1 325 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 TapbplQ8VD31 451 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1317Q8VF84 316 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1467Q8VFW1 308 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr161Q8VGB9 313 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ska1Q9CPV1 254 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 PglsQ9CQ60 257 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 D730048I06RikQ9CQB8 106 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tomm34Q9CYG7 309 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Toe1Q9D2E2 511 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Psg23Q9D2U0 471 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Stx11Q9D3G5 287 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Psg21Q9DAV5 471 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pycr3Q9DCC4 274 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 PtgfrnQ9WV91 879 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 PrknQ9WVS6 464 aa8.12□□□□□ -1.11
Trim39-201ENSMUST00000042717 Iglc4A0A0G2JEK5 104 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1375A0A0N4SUP0 313 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mpeg1A1L314 713 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm3149E9PW52 257 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn2r110E9PWD5 858 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm8180E9PXN0 145 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm21103E9Q2Q1 267 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 A430033K04RikE9Q8G5 680 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm7535F7CXE4 302 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm3476K7N6V0 257 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm8362K7N6Y6 257 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slc10a1O08705 362 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms