RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sat2Q6P8J2 170 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tas2r136Q7TQA8 305 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Commd7Q8BG94 200 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 CptpQ8BS40 216 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gpr26Q8BZA7 337 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gykl1Q8C635 549 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 D2hgdhQ8CIM3 535 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r217Q8R270 298 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Grk5Q8VEB1 590 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc27a4Q91VE0 643 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Abcg5Q99PE8 652 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmprss6Q9DBI0 811 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nme7Q9QXL8 395 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Psma1Q9R1P4 263 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc37a4A0A1L1SUI3 450 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vsig10lD3YZF7 868 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr31E9Q3K2 317 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Msl3l2G3X992 371 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm5571P01639 130 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 LckP06240 509 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmem248Q3TBN1 314 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mfsd13aQ6PDE8 519 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ctdsp2Q8BX07 270 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Stk-ps2Q8C0V7 499 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nadk2Q8C5H8 452 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ppp1r3bQ8C767 284 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Znf628Q8CJ78 1038 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Serinc2Q8K0E7 450 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lims2Q91XD2 341 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rpe65Q91ZQ5 533 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rhox2aQ9D4Y3 191 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc6a19Q9D687 634 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 PmpcaQ9DC61 524 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Dusp13Q9QYJ7 198 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Srd5a3Q9WUP4 330 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Shank3Q4ACU6 1730 aa9.76□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 A0A1W2P799 418 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm14085A2AWR5 660 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn2r110E9PWD5 858 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r12G5E8G1 307 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gpx5P21765 221 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 FauP35545 74 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rln1P47932 185 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zfp41Q02526 198 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Dusp5Q1HL35 384 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ahsa1Q8BK64 338 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Q8BPC6 396 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Kiaa1671Q8BRV5 308 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Bpifb2Q8C1E1 462 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmem163Q8C996 288 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 CipcQ8R0W1 432 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mtfr2Q8VED8 361 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mrpl15Q9CPR5 295 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ccdc107Q9DCC3 242 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nrip3Q9JJR9 240 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Adam28Q9JLN6 793 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Asic5Q9R0Y1 495 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 FAM186AQ9D9R9 1790 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 TicrrQ8BQ33 1889 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn2r42O35192 852 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Acp2P24638 423 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm813Q3UWK9 176 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Armc5Q5EBP3 926 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Shc4Q6S5L9 626 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Methig1Q76I26 264 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr309Q7TS01 308 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Clec18aQ7TSQ1 534 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hs6st2Q80UW0 612 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 PimregQ8BFY7 231 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sertm1Q8CD78 107 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sphk1Q8CI15 382 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lgi4Q8K1S1 537 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cacnb4Q8R0S4 519 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r234Q8R298 329 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 McatQ8R3F5 381 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr868Q8VFI8 309 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 AjubaQ91XC0 547 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mrps28Q9CY16 186 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lpar3Q9EQ31 354 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 RhagQ9QUT0 438 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm29797A0A140LIA7 188 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sult6b2B7ZWN4 290 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hmgb3O54879 200 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cdk1P11440 297 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Uap1l1Q3TW96 507 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc35f2Q7TML3 375 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Kirrel2Q7TSU7 700 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Prdx6bQ8BG37 224 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Unc5aQ8K1S4 898 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r30Q8R2D2 302 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1Q8VGI1 314 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ubap2Q91VX2 1132 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lrg1Q91XL1 342 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Steap1Q9CWR7 339 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Wdr53Q9DB94 358 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slco2a1Q9EPT5 643 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 SncgQ9Z0F7 123 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm13420A0A140LJJ2 248 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 4930426L09RikE9Q0N7 123 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01644 108 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms