RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Igfbp2P47877 305 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 IgfalsP70389 603 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 UrodP70697 367 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Taf1aP97357 453 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Ugt8Q64676 541 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Ccdc85bQ6PDY0 202 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 AY358078Q6UY53 465 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Tmc6Q7TN60 810 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Yipf6Q8BR70 236 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Mptx1Q8R1M8 219 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr551Q8VG23 315 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Ppp2r2dQ925E7 453 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Med27Q9DB40 311 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Aif1lQ9EQX4 150 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Cts6Q9ET52 334 aa15.46■□□□□ 0.07
Shh-201ENSMUST00000002708 Ighv6-6A0A075B5T3 119 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 MbpP04370 250 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Cdk1P11440 297 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 EgflamQ4VBE4 1017 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Nr0b2Q62227 260 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Fjx1Q8BQB4 450 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Gpr158Q8C419 1200 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Crispld1Q8CGD2 500 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Gulp1Q8K2A1 304 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Rnf121Q8R1Z9 327 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr689Q8VG18 320 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 SmoxQ99K82 555 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmed9Q99KF1 235 aaKnown RBP15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Rprd1bQ9CSU0 326 aaKnown RBP15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Eef1e1Q9D1M4 174 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Pnp2Q9D8C9 305 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Erp27Q9D8U3 272 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Pfn3Q9DAD6 137 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Arpc3Q9JM76 178 aaKnown RBP15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Tinf2Q9QXG9 341 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Crybg1A0A0G2JG52 2065 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Adam3F8VQ03 822 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Drd2P61168 444 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Dppa5bP85965 119 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Arntl2Q2VPD4 579 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 March9Q3TZ87 348 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Orm1Q60590 207 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Lrrtm4Q80XG9 590 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc25a12Q8BH59 677 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Kcnmb1Q8CAE3 191 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Scamp1Q8K021 338 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Kremen2Q8K1S7 461 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr853Q8VGG6 305 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Glipr1Q9CWG1 255 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Ccdc107Q9DCC3 242 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Nacc2Q9DCM7 586 aa15.45■□□□□ 0.06
Shh-201ENSMUST00000002708 Igkv4-86A0A0G2JGE7 114 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm13420A0A140LJJ2 248 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 1700023F06RikA2AB62 382 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Wdr76A6PWY4 622 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Skint9A7TZG3 319 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm21904A8HG57 180 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm7714E9Q079 131 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 2610021A01RikE9Q0Q3 834 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm21866J3QMH4 180 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Dbx1P52950 335 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 NovQ64299 354 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm10330Q8BKS1 112 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Orai1Q8BWG9 304 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 ReltQ8BX43 436 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr525Q8VGL5 309 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Senp8Q9D2Z4 221 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 4933421I07RikQ9D420 214 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Cpn2Q9DBB9 547 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc38a3Q9DCP2 505 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Dclk1Q9JLM8 756 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm5475D3YV11 175 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm10338K7N692 204 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Rgs5O08850 181 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Cnih2O35089 160 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 F9P16294 471 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Lhx1P63006 406 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Smad5P97454 465 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Bcl2a1Q07440 172 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Tpgs2Q66JT5 296 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Q6P1I3 445 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Cd3eapQ76KJ5 399 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr1140Q7TR39 311 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 PeloQ80X73 385 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Supv3l1Q80YD1 779 aaKnown RBP15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Med19Q8C1S0 244 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Trmt10aQ8C1Z8 328 aaKnown RBP15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Cox10Q8CFY5 443 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Plekho2Q8K124 495 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr668Q8VGW3 318 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Cacng6Q8VHW3 260 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc3a1Q91WV7 685 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Tex46Q9CPU3 165 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Ccdc3Q9D6Y1 273 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Serinc3Q9QZI9 472 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm8229K7N749 213 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Gtpbp1O08582 668 aaKnown RBP15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Aldh1a7O35945 501 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Zw10O54692 779 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Il1r2P27931 410 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms