RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 K7EM74 188 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 CHST10O43529 356 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 DNAJB5O75953 348 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 OR2B3O76000 313 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 CYC1P08574 325 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 CSF2RBP32927 897 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 SOX11P35716 441 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 HMGA2P52926 109 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 PPP1CAP62136 330 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 KCNJ10P78508 379 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 IGLV3-21P80748 117 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-234ENST00000642041 STX4Q12846 297 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 PRSS53Q2L4Q9 553 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 NKAIN2Q5VXU1 208 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 OR4D9Q8NGE8 314 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 PMEPA1Q969W9 287 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 POLR2J2Q9GZM3 115 aaKnown RBP16.02■□□□□ 0.16
PHGDH-234ENST00000642041 POLR2J3Q9H1A7 115 aaKnown RBP16.02■□□□□ 0.16
PHGDH-234ENST00000642041 PIGUQ9H490 435 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 GPN2Q9H9Y4 310 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-234ENST00000642041 NTN4Q9HB63 628 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 PNPLA3Q9NST1 481 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 B3GALT1Q9Y5Z6 326 aa16.02■□□□□ 0.16
PHGDH-234ENST00000642041 GPC6Q9Y625 555 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-234ENST00000642041 PDZD2O15018 2839 aa16.02■□□□□ 0.15
PHGDH-234ENST00000642041 MKRN2OSH3BPM6 223 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 OR10H2O60403 315 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 UGT2B11O75310 529 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 ALPLP05186 524 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 BCHEP06276 602 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 ALOX5P09917 674 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 NUDT7P0C024 238 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 CAPGP40121 348 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 BLMHQ13867 455 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 NRF1Q16656 503 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 CRTC2Q53ET0 693 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-234ENST00000642041 ASB18Q6ZVZ8 466 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 C16orf62Q7Z3J2 963 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 SZRD1Q7Z422 152 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 MMP21Q8N119 569 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 C10orf111Q8N326 155 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 SETD9Q8NE22 299 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 MAGEE2Q8TD90 523 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-234ENST00000642041 KIAA1143Q96AT1 154 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-234ENST00000642041 TMEM19Q96HH6 336 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 C7orf34Q96L11 122 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 ART5Q96L15 291 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 ZNF300Q96RE9 604 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-234ENST00000642041 ADI1Q9BV57 179 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 DDA1Q9BW61 102 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 PINK1Q9BXM7 581 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 KLHL25Q9H0H3 589 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 PRTFDC1Q9NRG1 225 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 NDUFA13Q9P0J0 144 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 ENPP4Q9Y6X5 453 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 HIVEP1P15822 2718 aa16.01■□□□□ 0.15
PHGDH-234ENST00000642041 IGHV5-51A0A0C4DH38 117 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 GLOD5A6NK44 160 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 UPK1AO00322 258 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 MFN2O95140 757 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 OXSR1O95747 527 aaPredicted RBP16■□□□□ 0.15
PHGDH-234ENST00000642041 OR12D1P0DN82 309 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 THRBP10828 461 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 RRM2P31350 389 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 KCNJ5P48544 419 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 PRKAG1P54619 331 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 LASP1Q14847 261 aaKnown RBP16■□□□□ 0.15
PHGDH-234ENST00000642041 ARHGAP11BQ3KRB8 267 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 SLC36A3Q495N2 470 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 EIPR1Q53HC9 387 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 ZNF628Q5EBL2 1059 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 HEPHL1Q6MZM0 1159 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 TNFAIP8L2Q6P589 184 aaPredicted RBP16■□□□□ 0.15
PHGDH-234ENST00000642041 TMEM107Q6UX40 140 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 OR7G1Q8NGA0 311 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 OR9A2Q8NGT5 310 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 MAL2Q969L2 176 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 CTHRC1Q96CG8 243 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 OR7D2Q96RA2 312 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 SLC29A1Q99808 456 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 TREX2Q9BQ50 279 aaPredicted RBP16■□□□□ 0.15
PHGDH-234ENST00000642041 PSD2Q9BQI7 771 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 NUDT22Q9BRQ3 303 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 CUTCQ9NTM9 273 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 C5AR2Q9P296 337 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 PRODH2Q9UF12 536 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 KLHL3Q9UH77 587 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 SAMHD1Q9Y3Z3 626 aaKnown RBP16■□□□□ 0.15
PHGDH-234ENST00000642041 V9GYQ6 96 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 MTORP42345 2549 aa16■□□□□ 0.15
PHGDH-234ENST00000642041 TMEM150CB9EJG8 249 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 SOCS2O14508 198 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 EI24O14681 340 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 DSCR3O14972 297 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 NT5EP21589 574 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 MYF6P23409 242 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 PSMD4P55036 377 aaKnown RBP15.99■□□□□ 0.15
PHGDH-234ENST00000642041 PPP2R2BQ00005 443 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 SLC13A2Q13183 592 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 TOP3AQ13472 1001 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms