RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	HR	O43593	1189 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	ALPP	P05187	535 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	GKN3P	P0CG01	181 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	APEX1	P27695	318 aa	Known RBP	15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	SGCG	Q13326	291 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	GLYR1	Q49A26	553 aa	Predicted RBP	15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	DEFB134	Q4QY38	66 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	FLCN	Q8NFG4	579 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	NACC2	Q96BF6	587 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBX5	Q99593	518 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	CTRC	Q99895	268 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597	PINK1	Q9BXM7	581 aa		15.74	■□□□□ 0.11
PHGDH-223	ENST00000641597		A0A0G2JPF8	293 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	HNRNPCL2	B2RXH8	293 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	HNRNPCL3	B7ZW38	293 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	HNRNPCL4	P0DMR1	293 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	DDX5	P17844	614 aa	Known RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	RGS8	P57771	180 aa	Predicted RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	TFF2	Q03403	129 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	P2RY14	Q15391	338 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	TMEM35A	Q53FP2	167 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	SMARCD3	Q6STE5	483 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	RAB42	Q8N4Z0	105 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	SCAI	Q8N9R8	606 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	ATP6V1C2	Q8NEY4	427 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	ZNF486	Q96H40	463 aa	Predicted RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	SLC17A9	Q9BYT1	436 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	C11orf54	Q9H0W9	315 aa	Predicted RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	N6AMT1	Q9Y5N5	214 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597		A0A0B4J293	547 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	FABP12	A6NFH5	140 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	CD8B2	A6NJW9	211 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	P2RX6	O15547	441 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	TMCC2	O75069	709 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	CCNYL3	P0C7X3	344 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	NR2F6	P10588	404 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	CD8B	P10966	210 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	CEL	P19835	753 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	CDH11	P55287	796 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	TRA2B	P62995	288 aa	Known RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	CSTF1	Q05048	431 aa	Known RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	GPM6B	Q13491	265 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	SLC35F1	Q5T1Q4	408 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	C6orf183	Q5T699	404 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	SLC36A4	Q6YBV0	504 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	ZNF517	Q6ZMY9	492 aa	Predicted RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	RRM2B	Q7LG56	351 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	PRSS41	Q7RTY9	318 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	GDF7	Q7Z4P5	450 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	TRIM69	Q86WT6	500 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	RNF31	Q96EP0	1072 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	ISG20L2	Q9H9L3	353 aa	Known RBP	15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	SLC13A4	Q9UKG4	626 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	TRAPPC4	Q9Y296	219 aa		15.73	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3D	A0A087WVF3	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3I	A0A087WXS9	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3E	A0A087X179	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3K	A0A087X1G2	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3F	A6NER0	549 aa	Predicted RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3L	B9A6J9	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	EMC8	O43402	210 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3H	P0C7X1	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	MPI	P34949	423 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	AHR	P35869	848 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	PRR5	P85299	388 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	SRSF5	Q13243	272 aa	Known RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	GPR68	Q15743	365 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	MAPK14	Q16539	360 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TRMT12	Q53H54	448 aa	Known RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	FCRLB	Q6BAA4	426 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3G	Q6DHY5	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3C	Q6IPX1	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TMEM64	Q6YI46	380 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	PLEKHM3	Q6ZWE6	761 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	RTL10	Q7L3V2	364 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TRIM48	Q8IWZ4	208 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TBC1D3	Q8IZP1	549 aa	Predicted RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	FRMD1	Q8N878	549 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	FGF14	Q92915	247 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	ZNF764	Q96H86	408 aa	Predicted RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	KCTD7	Q96MP8	289 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	MCHR1	Q99705	422 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	SLC7A7	Q9UM01	511 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	MRPS2	Q9Y399	296 aa	Known RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	IQCM	A0A1B0GVH7	501 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	ACADM	P11310	421 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	SLC1A3	P43003	542 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	RACK1	P63244	317 aa	Known RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	BNC1	Q01954	994 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	DMPK	Q09013	629 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	ZNF155	Q12901	538 aa	Predicted RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	PLK5	Q496M5	336 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	C3orf38	Q5JPI3	329 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	WDR88	Q6ZMY6	472 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	FRRS1	Q6ZNA5	592 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	SIRT6	Q8N6T7	355 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	ZNF485	Q8NCK3	441 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	TSACC	Q96A04	125 aa	Predicted RBP	15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	SAMD8	Q96LT4	415 aa		15.72	■□□□□ 0.11
PHGDH-223	ENST00000641597	SMAD5	Q99717	465 aa	Known RBP	15.72	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms