RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	FRG1	Q14331	258 aa	Known RBP	5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF273	Q14593	569 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	GLE1	Q53GS7	698 aa	Known RBP	5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF789	Q5FWF6	425 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	TCTE1	Q5JU00	501 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	PAPD7	Q5XG87	772 aa	Known RBP	5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	RHBDD2	Q6NTF9	364 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	FAM199X	Q6PEV8	388 aa	Predicted RBP	5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	ZYG11A	Q6WRX3	759 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	CDHR3	Q6ZTQ4	885 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	AMIGO2	Q86SJ2	522 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	CLEC1A	Q8NC01	280 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	CAMKV	Q8NCB2	501 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	OR56B2P	Q8NGI1	322 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	NAT14	Q8WUY8	206 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	C1orf54	Q8WWF1	131 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	RAB40A	Q8WXH6	277 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC9A6	Q92581	669 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	RAD51AP1	Q96B01	352 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	CFAP36	Q96G28	342 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	PGAM5	Q96HS1	289 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	C5orf34	Q96MH7	638 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	OR2A14	Q96R47	310 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	ERP44	Q9BS26	406 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	PIMREG	Q9BSJ6	248 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC29A3	Q9BZD2	475 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	XKR8	Q9H6D3	395 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	SERINC1	Q9NRX5	453 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	FAM114A2	Q9NRY5	505 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	IARS2	Q9NSE4	1012 aa	Known RBP	5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	UTP6	Q9NYH9	597 aa	Known RBP	5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	GPR83	Q9NYM4	423 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	IL1RAPL1	Q9NZN1	696 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	UPB1	Q9UBR1	384 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	NXT1	Q9UKK6	140 aa	Known RBP	5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	DTX4	Q9Y2E6	619 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	LIPG	Q9Y5X9	500 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	PRSS21	Q9Y6M0	314 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	POLE	Q07864	2286 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523	HIVEP3	Q5T1R4	2406 aa		5.85	□□□□□ -1.47
CASC19-238	ENST00000641523		A0A1B0GX78	115 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	MAGEB16	A2A368	324 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	OR51F1	A6NGY5	319 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	ARGFX	A6NJG6	315 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TARM1	B6A8C7	271 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523		M0QX08	132 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	RRH	O14718	337 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	RASGRF2	O14827	1237 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	OR1I1	O60431	355 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	PAGE4	O60829	102 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	CEACAM4	O75871	244 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	JTB	O76095	146 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	PTBP3	O95758	552 aa	Known RBP	5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	PRSS56	P0CW18	603 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	PVR	P15151	417 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TPSB2	P20231	275 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	CD9	P21926	228 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	CCR7	P32248	378 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	HSD17B2	P37059	387 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	SKIV2L2	P42285	1042 aa	Known RBP	5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	PITPNB	P48739	271 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	CCL11	P51671	97 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	RPS18	P62269	152 aa	Known RBP	5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	EFNB1	P98172	346 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TPSAB1	Q15661	275 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TTLL9	Q3SXZ7	439 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	VWA5B1	Q5TIE3	1220 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	IRAK1BP1	Q5VVH5	260 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	FAM198B	Q6UWH4	519 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	ANGPTL8	Q6UXH0	198 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF534	Q76KX8	674 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	ADCK2	Q7Z695	626 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TMEM135	Q86UB9	458 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TICAM1	Q8IUC6	712 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TTC29	Q8NA56	475 aa	Predicted RBP	5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC38A9	Q8NBW4	561 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	SETD9	Q8NE22	299 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	OR2Y1	Q8NGV0	311 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	OR2L8	Q8NGY9	312 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	SKA2	Q8WVK7	121 aa	Predicted RBP	5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	PTER	Q96BW5	349 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	DTNBP1	Q96EV8	351 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	PAIP2	Q9BPZ3	127 aa	Known RBP	5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	KIFC1	Q9BW19	673 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	MRPL1	Q9BYD6	325 aa	Known RBP	5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	CRLF2	Q9HC73	371 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	MLXIPL	Q9NP71	852 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	LZTFL1	Q9NQ48	299 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	TREX1	Q9NSU2	369 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	ATAD3A	Q9NVI7	634 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	EURL	Q9NYK6	297 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	SPATA7	Q9P0W8	599 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC2A6	Q9UGQ3	507 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	ESPL1	Q14674	2120 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	MYO9A	B2RTY4	2548 aa		5.84	□□□□□ -1.47
CASC19-238	ENST00000641523	MAGEB3	O15480	346 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	SRPX2	O60687	465 aa	Predicted RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	SIX3	O95343	332 aa	Predicted RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	UROS	P10746	265 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	MLN	P12872	115 aa		5.84	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms