RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GKN3PP0CG01 181 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 ACADMP11310 421 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 DDX5P17844 614 aaKnown RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 HIST1H1TP22492 207 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 MAP2K3P46734 347 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PRDX1Q06830 199 aaKnown RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 RAB40BQ12829 278 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 Q5BKY6 102 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 ENTPD8Q5MY95 495 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PLBD1Q6P4A8 553 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PSRC1Q6PGN9 363 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 TMEFF1Q8IYR6 380 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 YIPF7Q8N8F6 280 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 OR4E2Q8NGC2 313 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 OR2A1Q8NGT9 310 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PIGXQ8TBF5 258 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 SMG7Q92540 1137 aaKnown RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 LINC00615Q96LM1 132 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 TRPV5Q9NQA5 729 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 ACSS1Q9NUB1 689 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 MAFFQ9ULX9 164 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PAICSP22234 425 aaKnown RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 DDX6P26196 483 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 GCGRP47871 477 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PDX1P52945 283 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 KIAA0907Q7Z7F0 614 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 OR4Q3Q8NH05 313 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 BBS10Q8TAM1 723 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PHF21AQ96BD5 680 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 TRIM45Q9H8W5 580 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 PELI2Q9HAT8 420 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 B3GAT2Q9NPZ5 323 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 ACAD8Q9UKU7 415 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 GABRPO00591 440 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 ASGR2P07307 311 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 CSNK2A2P19784 350 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 ENDOUP21128 410 aaKnown RBP13.68□□□□□ -0.22
SCARB2-221ENST00000640341 TRAM2Q15035 370 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 ARHGEF6Q15052 776 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 CLDN22Q8N7P3 220 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 CAMK1GQ96NX5 476 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 DENND4CQ5VZ89 1909 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 A0A0A6YYD5 115 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SLC31A1O15431 190 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 YES1P07947 543 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 IFNGR2P38484 337 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 DDOSTP39656 456 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 PRR5P85299 388 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 ST3GAL3Q11203 375 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 C3orf38Q5JPI3 329 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 BHLHB9Q6PI77 547 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 ARL9Q6T311 187 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SHISA5Q8N114 240 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 GDPD1Q8N9F7 314 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 OR10H4Q8NGA5 316 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 DPH1Q9BZG8 443 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SYNPO2LQ9H987 977 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SLC7A7Q9UM01 511 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 ALG5Q9Y673 324 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 ZNF780BQ9Y6R6 833 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 GSTM3P21266 225 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 MPIP34949 423 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SIM1P81133 766 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-221ENST00000640341 DPTQ07507 201 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 NDUFA9Q16795 377 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 OR52E1Q8NGJ3 308 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 DHRS1Q96LJ7 313 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SNX18Q96RF0 628 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SLC38A1Q9H2H9 487 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 ADAP2Q9NPF8 381 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 WASH6PQ9NQA3 447 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 MCUBQ9NWR8 336 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 TNFRSF10DQ9UBN6 386 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 NDOR1Q9UHB4 597 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 PRUNE2Q8WUY3 3088 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 CXorf51AA0A1B0GTR3 108 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 AKR7A2O43488 359 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 PRKAR1AP10644 381 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 CPN2P22792 545 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 GABRA5P31644 462 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 RAB28P51157 221 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SEC13P55735 322 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SNRPNP63162 240 aaKnown RBP13.67□□□□□ -0.22
SCARB2-221ENST00000640341 SLC3A1Q07837 685 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 ASAH1Q13510 395 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 MTFR2Q6P444 385 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 MTSS1LQ765P7 747 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 GET4Q7L5D6 327 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-221ENST00000640341 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 GNPDA2Q8TDQ7 276 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 CDS1Q92903 461 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 OTUB2Q96DC9 234 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 MS4A6EQ96DS6 147 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 WDFY2Q96P53 400 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 GALNT9Q9HCQ5 603 aa13.67□□□□□ -0.22
SCARB2-221ENST00000640341 EXTL2Q9UBQ6 330 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms