RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 FADS6Q8N9I5 356 aa15.25■□□□□ 0.03
SMN2-216ENST00000638794 ACMSDQ8TDX5 336 aa15.25■□□□□ 0.03
SMN2-216ENST00000638794 DSN1Q9H410 356 aa15.25■□□□□ 0.03
SMN2-216ENST00000638794 GSX1Q9H4S2 264 aaPredicted RBP15.25■□□□□ 0.03
SMN2-216ENST00000638794 MID1IP1Q9NPA3 183 aa15.25■□□□□ 0.03
SMN2-216ENST00000638794 A0A087WV62 115 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 COQ9O75208 318 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 GSTA1P08263 222 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 DIO3P55073 304 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 EEF1A1P68104 462 aaKnown RBP15.24■□□□□ 0.03
SMN2-216ENST00000638794 BCL2A1Q16548 175 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 EEF1A1P5Q5VTE0 462 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 FAM71E1Q6IPT2 247 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 P4HA3Q7Z4N8 544 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 UBQLNLQ8IYU4 475 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 CCNYL1Q8N7R7 359 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 WFDC11Q8NEX6 87 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 OR2M3Q8NG83 312 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMN2-216ENST00000638794 MZB1Q8WU39 189 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 MIEF1Q9NQG6 463 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 FLRT3Q9NZU0 649 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 PSMC3IPQ9P2W1 217 aaPredicted RBP15.24■□□□□ 0.03
SMN2-216ENST00000638794 EMCNQ9ULC0 261 aa15.24■□□□□ 0.03
SMN2-216ENST00000638794 C19orf53Q9UNZ5 99 aaPredicted RBP15.24■□□□□ 0.03
SMN2-216ENST00000638794 SLC22A20A6NK97 555 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 G3V2L1 256 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 FADS1O60427 444 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 SLITRK5O94991 958 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 PEPDP12955 493 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 HOXB4P17483 251 aaPredicted RBP15.23■□□□□ 0.03
SMN2-216ENST00000638794 STX5Q13190 355 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 CYP27C1Q4G0S4 372 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 RAET1LQ5VY80 246 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 SMPDL3BQ92485 455 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 STARD4Q96DR4 205 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 RTN4RQ9BZR6 473 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 GLIPR2Q9H4G4 154 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 MYNNQ9NPC7 610 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 TAS2R7Q9NYW3 318 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 MED11Q9P086 117 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 TBK1Q9UHD2 729 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 GRID1Q9ULK0 1009 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 ABCG2Q9UNQ0 655 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 TESMINQ9Y4I5 508 aa15.23■□□□□ 0.03
SMN2-216ENST00000638794 POLR3HQ9Y535 204 aaPredicted RBP15.23■□□□□ 0.03
SMN2-216ENST00000638794 H0YC42 278 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 UPK1AO00322 258 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 MSTNO14793 375 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 SMNDC1O75940 238 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMN2-216ENST00000638794 PSMG1O95456 288 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 CRHP06850 196 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 FAM153BP0C7A2 387 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 MYL2P10916 166 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 FOSL1P15407 271 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 HK1P19367 917 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 CD53P19397 219 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 NTSP30990 170 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 TPD52P55327 224 aaPredicted RBP15.22■□□□□ 0.03
SMN2-216ENST00000638794 CLDN15P56746 228 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 FAM27E3Q08E93 113 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 SLC29A2Q14542 456 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 DECR1Q16698 335 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 IMPG1Q17R60 797 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 FAM153CQ494X1 144 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 OR2A2Q6IF42 318 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 VWA1Q6PCB0 445 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 CHMP1BQ7LBR1 199 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 OR2L13Q8N349 312 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 CNEP1R1Q8N9A8 125 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 FIG4Q92562 907 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 DDX18Q9NVP1 670 aaKnown RBP15.22■□□□□ 0.03
SMN2-216ENST00000638794 NDRG3Q9UGV2 375 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 DCDC2Q9UHG0 476 aa15.22■□□□□ 0.03
SMN2-216ENST00000638794 CASKO14936 926 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 SEC14L5O43304 696 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 SUCLG1P53597 346 aaKnown RBP15.21■□□□□ 0.03
SMN2-216ENST00000638794 GANABQ14697 944 aaKnown RBP15.21■□□□□ 0.03
SMN2-216ENST00000638794 ZYG11AQ6WRX3 759 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 FRMD7Q6ZUT3 714 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 TRIM46Q7Z4K8 759 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 KRTAP1-3Q8IUG1 177 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 MEIOBQ8N635 442 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 OR5M1Q8NGP8 315 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 ELP4Q96EB1 424 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 CCDC126Q96EE4 140 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 AMDHD1Q96NU7 426 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 TXLNGYQ9BZA5 131 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 NEUROD4Q9HD90 331 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 Q9N2J8 555 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 SDHAF3Q9NRP4 125 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 FAM120CQ9NX05 1096 aaKnown RBP15.21■□□□□ 0.03
SMN2-216ENST00000638794 ZNF337Q9Y3M9 751 aa15.21■□□□□ 0.03
SMN2-216ENST00000638794 A0A1W2PPM1 405 aa15.2■□□□□ 0.02
SMN2-216ENST00000638794 OR2M5A3KFT3 312 aa15.2■□□□□ 0.02
SMN2-216ENST00000638794 H3BML4 177 aa15.2■□□□□ 0.02
SMN2-216ENST00000638794 SIAH2O43255 324 aa15.2■□□□□ 0.02
SMN2-216ENST00000638794 GLRA3O75311 464 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms