RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 KLRF1Q9NZS2 232 aa19.91■□□□□ 0.78
SCN1B-206ENST00000638536 MAPRE3Q9UPY8 281 aa19.91■□□□□ 0.78
SCN1B-206ENST00000638536 SLC5A6Q9Y289 635 aa19.91■□□□□ 0.78
SCN1B-206ENST00000638536 CPSF4O95639 269 aaKnown RBP19.9■□□□□ 0.78
SCN1B-206ENST00000638536 IL33O95760 270 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 IGHG3P01860 377 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 ENDOUP21128 410 aaKnown RBP19.9■□□□□ 0.78
SCN1B-206ENST00000638536 GAS1P54826 345 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 RPP38P78345 283 aaKnown RBP19.9■□□□□ 0.78
SCN1B-206ENST00000638536 DECR1Q16698 335 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 C4orf17Q53FE4 359 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 OR5M10Q6IEU7 315 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 ANGPTL8Q6UXH0 198 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 Q6ZPB1 254 aaPredicted RBP19.9■□□□□ 0.78
SCN1B-206ENST00000638536 PACS2Q86VP3 889 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 WDSUB1Q8N9V3 476 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 JADE3Q92613 823 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 TMCO6Q96DC7 493 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 TMEM41AQ96HV5 264 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 UBQLN3Q9H347 655 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 SERHL2Q9H4I8 314 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 NEUROD4Q9HD90 331 aa19.9■□□□□ 0.78
SCN1B-206ENST00000638536 PRSS51A0A1B0GVH4 220 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 UBDO15205 165 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 ABCB7O75027 752 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 LDLRP01130 860 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 S100A3P33764 101 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 SOAT1P35610 550 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 CA7P43166 264 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 MASP1P48740 699 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 CLNS1AP54105 237 aaKnown RBP19.89■□□□□ 0.77
SCN1B-206ENST00000638536 CASP9P55211 416 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 RPS26P62854 115 aaKnown RBP19.89■□□□□ 0.77
SCN1B-206ENST00000638536 EFR3AQ14156 821 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 SLC10A1Q14973 349 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 SPDYE7PQ495Y7 208 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 PDCD4Q53EL6 469 aaKnown RBP19.89■□□□□ 0.77
SCN1B-206ENST00000638536 CCNJQ5T5M9 372 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 TIGD3Q6B0B8 471 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 SLC30A6Q6NXT4 461 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 FIGNL1Q6PIW4 674 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 PAOXQ6QHF9 649 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 C3P1Q6ZMU1 363 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 NCCRP1Q6ZVX7 275 aaPredicted RBP19.89■□□□□ 0.77
SCN1B-206ENST00000638536 TRILQ7L0X0 811 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 OR4A15Q8NGL6 344 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 CDS1Q92903 461 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 SLC6A15Q9H2J7 730 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 TCF7L2Q9NQB0 619 aa19.89■□□□□ 0.77
SCN1B-206ENST00000638536 SDR39U1Q9NRG7 319 aaPredicted RBP19.89■□□□□ 0.77
SCN1B-206ENST00000638536 NCOA6Q14686 2063 aaPredicted RBP19.89■□□□□ 0.77
SCN1B-206ENST00000638536 FADS1O60427 444 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 KCNK2O95069 426 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 TGDSO95455 350 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 IDO1P14902 403 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 ABOP16442 354 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 GDF1P27539 372 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 PTPN6P29350 595 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 PTGS2P35354 604 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 TRPC1P48995 793 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 MAN2A2P49641 1150 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 RBPJQ06330 500 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 SNTA1Q13424 505 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 EMC4Q5J8M3 183 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 APOOLQ6UXV4 268 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 DOLPP1Q86YN1 238 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 FAM110BQ8TC76 370 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 PHF12Q96QT6 1004 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 INPP5KQ9BT40 448 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 SPRR3Q9UBC9 169 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 C15orf41Q9Y2V0 281 aa19.88■□□□□ 0.77
SCN1B-206ENST00000638536 WIPF3A6NGB9 483 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 NPIPA2E9PIF3 369 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 NPIPA3F8WFD2 350 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 SNPHO15079 494 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 EDF1O60869 148 aaKnown RBP19.87■□□□□ 0.77
SCN1B-206ENST00000638536 PGRP06401 933 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 ALOX5P09917 674 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 CD1EP15812 388 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 EVI2BP34910 448 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 CDKN2CP42773 168 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 PRIM2P49643 509 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 PSPHP78330 225 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 DPY19L1Q2PZI1 675 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 VPS26BQ4G0F5 336 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 CDC73Q6P1J9 531 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 ARHGAP11AQ6P4F7 1023 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 ZCCHC12Q6PEW1 402 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 OR56A1Q8NGH5 318 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 OR5D16Q8NGK9 328 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 OR1J4Q8NGS1 313 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 RFWD2Q8NHY2 731 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 SFXN5Q8TD22 340 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 RELTQ969Z4 430 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 ACTRT3Q9BYD9 372 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 SERHLQ9NQF3 203 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 A0A1B0GVC2 190 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 TTC36A6NLP5 189 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 SCO2O43819 266 aa19.87■□□□□ 0.77
SCN1B-206ENST00000638536 SLC22A3O75751 556 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms