RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MRTO4Q9UKD2 239 aaKnown RBP14.72□□□□□ -0.05
CLN6-216ENST00000636876 CORO2BQ9UQ03 480 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 TRAV17A0A0B4J275 112 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 EVPLLA8MZ36 301 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 HMGN4O00479 90 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 TP53I11O14683 189 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 ATXN7O15265 892 aaPredicted RBP14.71□□□□□ -0.05
CLN6-216ENST00000636876 UGT2B11O75310 529 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 SLC25A12O75746 678 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 AK1P00568 194 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 PNLIPRP2P54317 469 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 PSMD4P55036 377 aaKnown RBP14.71□□□□□ -0.05
CLN6-216ENST00000636876 CBX1P83916 185 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 FADDQ13158 208 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 EFR3AQ14156 821 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.71□□□□□ -0.05
CLN6-216ENST00000636876 DCST2Q5T1A1 773 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 CCNJQ5T5M9 372 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 ATAD3BQ5T9A4 648 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 SPINK14Q6IE38 97 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 HEPHL1Q6MZM0 1159 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 FIGNL1Q6PIW4 674 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 HACD2Q6Y1H2 254 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 Q6ZS92 163 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 TRPM8Q7Z2W7 1104 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 NUP54Q7Z3B4 507 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 MDGA2Q7Z553 956 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 OR5M3Q8NGP4 307 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 PAQR8Q8TEZ7 354 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 HGDQ93099 445 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 TMEM125Q96AQ2 219 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 EFHD2Q96C19 240 aaPredicted RBP14.71□□□□□ -0.05
CLN6-216ENST00000636876 SLC39A3Q9BRY0 314 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 MFRPQ9BY79 579 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 SH2D2AQ9NP31 389 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 TIMMDC1Q9NPL8 285 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 ZNF462Q96JM2 2506 aa14.71□□□□□ -0.05
CLN6-216ENST00000636876 EIF4E1BA6NMX2 242 aaKnown RBP14.7□□□□□ -0.06
CLN6-216ENST00000636876 SP1P08047 785 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 CCL3P10147 92 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 BMP2P12643 396 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 CYP4B1P13584 511 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 CD46P15529 392 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 GPX2P18283 190 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 LCN1P31025 176 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 CPA2P48052 419 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 RFX3P48380 749 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 NUDT2P50583 147 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 MTPNP58546 118 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 DSTNP60981 165 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 FUT5Q11128 374 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 ART3Q13508 389 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 SELPLGQ14242 412 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 ARHGAP11BQ3KRB8 267 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 ZNF766Q5HY98 468 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 SLC6A19Q695T7 634 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 DESI1Q6ICB0 168 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 SLC25A25Q6KCM7 469 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 NANOGP8Q6NSW7 305 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 C16orf62Q7Z3J2 963 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 GALNT10Q86SR1 603 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 LSM14AQ8ND56 463 aaKnown RBP14.7□□□□□ -0.06
CLN6-216ENST00000636876 PSD4Q8NDX1 1056 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 SPPL2AQ8TCT8 520 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 SCMH1Q96GD3 660 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 C5orf34Q96MH7 638 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 SECISBP2Q96T21 854 aaKnown RBP14.7□□□□□ -0.06
CLN6-216ENST00000636876 SDF2Q99470 211 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 G6PC3Q9BUM1 346 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 THUMPD3Q9BV44 507 aaKnown RBP14.7□□□□□ -0.06
CLN6-216ENST00000636876 HES7Q9BYE0 225 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 TRIM8Q9BZR9 551 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 NANOGQ9H9S0 305 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 FBXO34Q9NWN3 711 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 THUMPD1Q9NXG2 353 aaKnown RBP14.7□□□□□ -0.06
CLN6-216ENST00000636876 CNOT11Q9UKZ1 510 aaKnown RBP14.7□□□□□ -0.06
CLN6-216ENST00000636876 B3GNT3Q9Y2A9 372 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 PCDHGB6Q9Y5F9 930 aa14.7□□□□□ -0.06
CLN6-216ENST00000636876 CHCHD2Q9Y6H1 151 aaPredicted RBP14.7□□□□□ -0.06
CLN6-216ENST00000636876 PRAMEF27A3QJZ7 478 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 HS6ST1O60243 411 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 NME2P1O60361 137 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 TNFRSF21O75509 655 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 C1QL1O75973 258 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 ZIC2O95409 532 aaPredicted RBP14.69□□□□□ -0.06
CLN6-216ENST00000636876 CBX6O95503 412 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 ATP6V1C1P21283 382 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 NME2P22392 152 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 RPP38P78345 283 aaKnown RBP14.69□□□□□ -0.06
CLN6-216ENST00000636876 ZNF169Q14929 603 aaPredicted RBP14.69□□□□□ -0.06
CLN6-216ENST00000636876 SLC22A10Q63ZE4 541 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 ZAR1Q86SH2 424 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 C10orf111Q8N326 155 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 FBXW8Q8N3Y1 598 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 OR8J3Q8NGG0 315 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 PNPLA2Q96AD5 504 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 NSL1Q96IY1 281 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 NODALQ96S42 347 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 SH3GL1Q99961 368 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 GPATCH1Q9BRR8 931 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms