RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 LIN28AQ9H9Z2 209 aaKnown RBP11.64□□□□□ -0.55
CTSD-208ENST00000636843 SLC24A3Q9HC58 644 aa11.64□□□□□ -0.55
CTSD-208ENST00000636843 NPDC1Q9NQX5 325 aaPredicted RBP11.64□□□□□ -0.55
CTSD-208ENST00000636843 SLAMF8Q9P0V8 285 aa11.64□□□□□ -0.55
CTSD-208ENST00000636843 GMPR2Q9P2T1 348 aaKnown RBP11.64□□□□□ -0.55
CTSD-208ENST00000636843 VPS29Q9UBQ0 182 aa11.64□□□□□ -0.55
CTSD-208ENST00000636843 MED13LQ71F56 2210 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 INTS1Q8N201 2190 aaKnown RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 OR14I1A6ND48 311 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 FAM90A27PA6NNH2 459 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 NPIPA2E9PIF3 369 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 NPIPA3F8WFD2 350 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 BCKDKO14874 412 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 ERN1O75460 977 aaKnown RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 TBX6O95947 436 aaPredicted RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 HOXD4P09016 255 aaPredicted RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 BMP2P12643 396 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 SDC1P18827 310 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 CERS1P27544 350 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 S100A3P33764 101 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 SOX3P41225 446 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 NEK2P51955 445 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 NUP107P57740 925 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 FOLH1Q04609 750 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 STX4Q12846 297 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 LAPTM5Q13571 262 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 SERTAD2Q14140 314 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 TBCELQ5QJ74 424 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 NOXRED1Q6NXP6 359 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 TMEM154Q6P9G4 183 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 C16orf47Q6ZP98 133 aaPredicted RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 RTL4Q6ZR62 310 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 VN1R5Q7Z5H4 357 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 IFNEQ86WN2 208 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 ANKFN1Q8N957 763 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 SRFBP1Q8NEF9 429 aaKnown RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 OR5L2Q8NGL0 311 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 OR5M3Q8NGP4 307 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 PTPMT1Q8WUK0 201 aaPredicted RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 POP5Q969H6 163 aaKnown RBP11.63□□□□□ -0.55
CTSD-208ENST00000636843 EME1Q96AY2 570 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 WDR34Q96EX3 536 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 APIPQ96GX9 242 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 ITCHQ96J02 903 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 SGCZQ96LD1 299 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 OR52E6Q96RD3 313 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 CSF3RQ99062 836 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 FAM173AQ9BQD7 235 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 TTTY12Q9BZ98 90 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 UCK2Q9BZX2 261 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 ROGDIQ9GZN7 287 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 LYRM4Q9HD34 91 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 C8orf4Q9NR00 106 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 DLGAP4Q9Y2H0 992 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 ZNF407Q9C0G0 2248 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 SPG11Q96JI7 2443 aa11.63□□□□□ -0.55
CTSD-208ENST00000636843 DNAJC13O75165 2243 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 A0A096LPI6 279 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 TCRBV5S2A0A599 114 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 PINLYPA6NC86 204 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 NKX2-6A6NCS4 301 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 FIGNL2A6NMB9 653 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 FAM166BA8MTA8 275 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 WWP2O00308 870 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 AKAP10O43572 662 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 GMNNO75496 209 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 SMNDC1O75940 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTSD-208ENST00000636843 GLSO94925 669 aaPredicted RBP11.62□□□□□ -0.55
CTSD-208ENST00000636843 IGHG3P01860 377 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 CD22P20273 847 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 PRPS1L1P21108 318 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 FASP25445 335 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 C21orf58P58505 322 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 RUNDC3AQ59EK9 446 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 LRIF1Q5T3J3 769 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 OPN5Q6U736 354 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 CCDC71Q8IV32 467 aaPredicted RBP11.62□□□□□ -0.55
CTSD-208ENST00000636843 ADGRG5Q8IZF4 528 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 FAM109AQ8N4B1 249 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 KRTCAP2Q8N6L1 136 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 PAPD5Q8NDF8 572 aaKnown RBP11.62□□□□□ -0.55
CTSD-208ENST00000636843 PPWD1Q96BP3 646 aaKnown RBP11.62□□□□□ -0.55
CTSD-208ENST00000636843 CCDC115Q96NT0 180 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 KCNC2Q96PR1 638 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 EFCAB11Q9BUY7 163 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 OR8D2Q9GZM6 311 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 PRDM7Q9NQW5 492 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 TNFRSF10DQ9UBN6 386 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.62□□□□□ -0.55
CTSD-208ENST00000636843 KCNN3Q9UGI6 736 aa11.62□□□□□ -0.55
CTSD-208ENST00000636843 A0A1B0GVC2 190 aa11.61□□□□□ -0.55
CTSD-208ENST00000636843 A6NHS1 94 aa11.61□□□□□ -0.55
CTSD-208ENST00000636843 TIPRLO75663 272 aa11.61□□□□□ -0.55
CTSD-208ENST00000636843 LYNP07948 512 aa11.61□□□□□ -0.55
CTSD-208ENST00000636843 ZNF26P17031 533 aaPredicted RBP11.61□□□□□ -0.55
CTSD-208ENST00000636843 TNNI3P19429 210 aa11.61□□□□□ -0.55
CTSD-208ENST00000636843 ACVR2AP27037 513 aa11.61□□□□□ -0.55
CTSD-208ENST00000636843 MTPNP58546 118 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms