RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 DGKQP52824 942 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 DSCR4P56555 118 aaPredicted RBP17.23■□□□□ 0.35
CLN6-213ENST00000636212 WNT3P56703 355 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 KRTAP10-9P60411 292 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 PRSS53Q2L4Q9 553 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 ARL13AQ5H913 290 aaPredicted RBP17.23■□□□□ 0.35
CLN6-213ENST00000636212 OR5M10Q6IEU7 315 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 Q6ZSR9 355 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 SZRD1Q7Z422 152 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 NAXEQ8NCW5 288 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 MBD3L2Q8NHZ7 208 aaPredicted RBP17.23■□□□□ 0.35
CLN6-213ENST00000636212 TCP10LQ8TDR4 215 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 TWIST2Q8WVJ9 160 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 RNASE6Q93091 150 aaKnown RBP17.23■□□□□ 0.35
CLN6-213ENST00000636212 PPP3R2Q96LZ3 170 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 ZFP3Q96NJ6 502 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 SLC17A7Q9P2U7 560 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 FBXL2Q9UKC9 423 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 LRBAP50851 2863 aa17.23■□□□□ 0.35
CLN6-213ENST00000636212 TBX19O60806 448 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 SLU7O95391 586 aaKnown RBP17.22■□□□□ 0.35
CLN6-213ENST00000636212 SDC1P18827 310 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 CHMP24386 653 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 RPL3P39023 403 aaKnown RBP17.22■□□□□ 0.35
CLN6-213ENST00000636212 GAB1Q13480 694 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 WDR93Q6P2C0 686 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 LRIG3Q6UXM1 1119 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 ZNF551Q7Z340 670 aaPredicted RBP17.22■□□□□ 0.35
CLN6-213ENST00000636212 KIF18BQ86Y91 864 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 RELL2Q8NC24 303 aaPredicted RBP17.22■□□□□ 0.35
CLN6-213ENST00000636212 OR2T11Q8NH01 316 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 GPR151Q8TDV0 419 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 MTERF3Q96E29 417 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 FCRL1Q96LA6 429 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 LMF2Q9BU23 707 aaKnown RBP17.22■□□□□ 0.35
CLN6-213ENST00000636212 MECRQ9BV79 373 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 TBL1XR1Q9BZK7 514 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 EQTNQ9NQ60 294 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 FAM120CQ9NX05 1096 aaKnown RBP17.22■□□□□ 0.35
CLN6-213ENST00000636212 L3MBTL1Q9Y468 752 aa17.22■□□□□ 0.35
CLN6-213ENST00000636212 FREM3P0C091 2139 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 ABCA12Q86UK0 2595 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 KDM4EB2RXH2 506 aaPredicted RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 EEF1E1-BLOC1S5C9J1V9 151 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 LSM1O15116 133 aaKnown RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 EEF1E1O43324 174 aaKnown RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 PSMG1O95456 288 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 IL33O95760 270 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 IL18BPO95998 194 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 TMIGD3P0DMS9 266 aaPredicted RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 GABRA3P34903 492 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 HPCAL1P37235 193 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 ZNF136P52737 540 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 PRKAG1P54619 331 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 GFRA1P56159 465 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 DLX5P56178 289 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 EEF1A1P68104 462 aaKnown RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 STX5Q13190 355 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 GANABQ14697 944 aaKnown RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 FBXL19-AS1Q494R0 122 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 RFTN2Q52LD8 501 aaPredicted RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 EEF1A1P5Q5VTE0 462 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 ANKRD26P1Q6NSI1 321 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 CDRT4Q8N9R6 151 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 NUP43Q8NFH3 380 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 CLHC1Q8NHS4 586 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 PPP1R14CQ8TAE6 165 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 AENQ8WTP8 325 aaKnown RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 RNF138Q8WVD3 245 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 CAVIN3Q969G5 261 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 TUBA1CQ9BQE3 449 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 DSN1Q9H410 356 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 TUBB1Q9H4B7 451 aa17.21■□□□□ 0.35
CLN6-213ENST00000636212 ACSS1Q9NUB1 689 aaPredicted RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 RPH3AQ9Y2J0 694 aaPredicted RBP17.21■□□□□ 0.35
CLN6-213ENST00000636212 PIP5K1BO14986 540 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 FADS1O60427 444 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 CHRNGP07510 517 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 PEPDP12955 493 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 HK1P19367 917 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 TCEA1P23193 301 aaKnown RBP17.2■□□□□ 0.34
CLN6-213ENST00000636212 GAS1P54826 345 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 EEFSECP57772 596 aaKnown RBP17.2■□□□□ 0.34
CLN6-213ENST00000636212 ATP6AP1LQ52LC2 224 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 RAET1LQ5VY80 246 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 P4HA3Q7Z4N8 544 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 ZZZ3Q8IYH5 903 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 GOT1L1Q8NHS2 421 aaPredicted RBP17.2■□□□□ 0.34
CLN6-213ENST00000636212 AGR3Q8TD06 166 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 SLC9A6Q92581 669 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 WNT2BQ93097 391 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 CIDECQ96AQ7 238 aaPredicted RBP17.2■□□□□ 0.34
CLN6-213ENST00000636212 BAIAP2L1Q9UHR4 511 aa17.2■□□□□ 0.34
CLN6-213ENST00000636212 CLCA1A8K7I4 914 aa17.19■□□□□ 0.34
CLN6-213ENST00000636212 TMEM233B4DJY2 109 aa17.19■□□□□ 0.34
CLN6-213ENST00000636212 LINC01387J3KSC0 135 aa17.19■□□□□ 0.34
CLN6-213ENST00000636212 EMC8O43402 210 aa17.19■□□□□ 0.34
CLN6-213ENST00000636212 UTS2O95399 124 aa17.19■□□□□ 0.34
CLN6-213ENST00000636212 BCKDHAP12694 445 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms