RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 EXOSC2Q13868 293 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 POU4F3Q15319 338 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 TJAP1Q5JTD0 557 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 PRAMEF8Q5VWM4 474 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 PRAMEF7Q5VXH5 474 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 CTRB2Q6GPI1 263 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 DPPA4Q7L190 304 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 NUDT13Q86X67 352 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 ADGRG3Q86Y34 549 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 NRSN1Q8IZ57 195 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 OR5D16Q8NGK9 328 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 AIF1LQ9BQI0 150 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 DPCDQ9BVM2 203 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 VN1R3Q9BXE9 311 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 ERVMER34-1Q9H9K5 563 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 KCNK12Q9HB15 430 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF275Q9NSD4 429 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 ZCCHC3Q9NUD5 404 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 BABAM2Q9NXR7 383 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 IL20Q9NYY1 176 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF224Q9NZL3 707 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 EMC3Q9P0I2 261 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 SCP2D1Q9UJQ7 156 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 RTCAO00442 366 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 SLC9A3R1O14745 358 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 SCO1O75880 301 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 SOX30O94993 753 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 TFPIP10646 304 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 TIMP2P16035 220 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 C4BPBP20851 252 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 DNASE1P24855 282 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 FPR3P25089 353 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 TRIM23P36406 574 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF81P51508 661 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 POU6F2P78424 691 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 PITPNAQ00169 270 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 CAMK2DQ13557 499 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF697Q5TEC3 545 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 BHLHB9Q6PI77 547 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 C16orf62Q7Z3J2 963 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 TOMM5Q8N4H5 51 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 F2RL3Q96RI0 385 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 CTPS2Q9NRF8 586 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 CNIH4Q9P003 139 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 MAB21L2Q9Y586 359 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 INSL5Q9Y5Q6 135 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 TPPPO94811 219 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 SULT1A3P0DMM9 295 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 SULT1A4P0DMN0 295 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF250P15622 560 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 UGT2B7P16662 529 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 THBS2P35442 1172 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 OMPP47874 163 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 MAP4K2Q12851 820 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 RAB33AQ14088 237 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 PGGHGQ32M88 737 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 LGALSLQ3ZCW2 172 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 SLC30A6Q6NXT4 461 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 SFXN4Q6P4A7 337 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 TMEM65Q6PI78 240 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 RTL4Q6ZR62 310 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 TRMT11Q7Z4G4 463 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 NR2C2APQ86WQ0 139 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 GID4Q8IVV7 300 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 TCEAL8Q8IYN2 117 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 ACBD7Q8N6N7 88 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 LMNTD1Q8N9Z9 388 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 FAM46AQ96IP4 442 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 AIFM2Q9BRQ8 373 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 CACNG6Q9BXT2 260 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 PELI2Q9HAT8 420 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 TRIM36Q9NQ86 728 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 LYARQ9NX58 379 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 ADAM29Q9UKF5 820 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 RASD1Q9Y272 281 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 GPR171O14626 319 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 GNSP15586 552 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 CXCL3P19876 107 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 PAICSP22234 425 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 WEE1P30291 646 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 NNMTP40261 264 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 CLCNKAP51800 687 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 GALEQ14376 348 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF267Q14586 743 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 UAP1L1Q3KQV9 507 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 SLC36A2Q495M3 483 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 PXDC1Q5TGL8 231 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 B3GLCTQ6Y288 498 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 C17orf64Q86WR6 236 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 CRIPAKQ8N1N5 446 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 GALNT11Q8NCW6 608 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 OR4Q3Q8NH05 313 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 RAD51AP1Q96B01 352 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 DDX31Q9H8H2 851 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 C5AR2Q9P296 337 aa13.88□□□□□ -0.19
CACNA1A-220ENST00000635988 FZD7O75084 574 aa13.87□□□□□ -0.19
CACNA1A-220ENST00000635988 LEFTY1O75610 366 aa13.87□□□□□ -0.19
CACNA1A-220ENST00000635988 TBX6O95947 436 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms