RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CHRM4P08173 479 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CHRM1P11229 460 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PBX2P40425 430 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CHRNA4P43681 627 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RNF4P78317 190 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RUNX3Q13761 415 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GINS1Q14691 196 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BATFQ16520 125 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SH3RF1Q7Z6J0 888 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 NOXA1Q86UR1 476 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GLIS3Q8NEA6 775 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CMTM2Q8TAZ6 248 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 LHX6Q9UPM6 363 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BCORL1Q5H9F3 1711 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SDK1Q7Z5N4 2213 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BLACEA4D250 179 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 HAPLN1P10915 354 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF44P15621 663 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ACRV1P26436 265 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PTPN6P29350 595 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CDKN2CP42773 168 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CLCN2P51788 898 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 HK3P52790 923 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GLO1Q04760 184 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GPR176Q14439 515 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 KCNJ8Q15842 424 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ACSBG2Q5FVE4 666 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 MINDY1Q8N5J2 469 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 OR7G2Q8NG99 324 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 HAS2Q92819 552 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM246Q9BRR3 403 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 UTP23Q9BRU9 249 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BEX2Q9BXY8 128 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ULBP3Q9BZM4 244 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BEX1Q9HBH7 125 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SLC7A7Q9UM01 511 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PCDHGA7Q9Y5G6 932 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 LMTK2Q8IWU2 1503 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 MST1RQ04912 1400 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 A0A1W2PPK0 400 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FEZF1A0PJY2 475 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 C20orf202A1L168 122 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 EEF1E1-BLOC1S5C9J1V9 151 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TULP2O00295 520 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SURF4O15260 269 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PRKYO43930 277 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ONECUT3O60422 494 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 KNG1P01042 644 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 DBHP09172 617 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CELP19835 753 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 HNRNPA2B1P22626 353 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GRPRP30550 384 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ACVRL1P37023 503 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 LBX1P52954 281 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 INCA1Q0VD86 236 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PLA2G7Q13093 441 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CCL14Q16627 93 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 H1FXQ92522 213 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SLC2A13Q96QE2 648 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 DPH7Q9BTV6 452 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SLC17A9Q9BYT1 436 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 EGLN1Q9GZT9 426 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FKRPQ9H9S5 495 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 KIAA1456Q9P272 454 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 YARS2Q9Y2Z4 477 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 LSM5Q9Y4Y9 91 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PSAT1Q9Y617 370 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 A0A1W2PP18 115 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 J3KR12 359 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM63AO94886 807 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TP53P04637 393 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 VASPP50552 380 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 KCNQ1P51787 676 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 EPHA5P54756 1037 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 RAC1P63000 192 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF45Q02386 682 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TLE1Q04724 770 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 APOFQ13790 326 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 EIF4HQ15056 248 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 METTL2BQ6P1Q9 378 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 FIGLAQ6QHK4 219 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NIPA2Q8N8Q9 360 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 FAM156AQ8NDB6 213 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 STT3BQ8TCJ2 826 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 RAB8BQ92930 207 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TSSK2Q96PF2 358 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SERINC2Q96SA4 455 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 PIP5K1AQ99755 562 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NXF5Q9H1B4 397 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SIDT1Q9NXL6 827 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 PTTG2Q9NZH5 202 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MYEF2Q9P2K5 600 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 RHCGQ9UBD6 479 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 OR14J1Q9UGF5 321 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ATG4BQ9Y4P1 393 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 DVL1O14640 695 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 KIAA0355O15063 1070 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MPC1LP0DKB6 136 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 PEX2P28328 305 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms