RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ZNF675Q8TD23 568 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 VSTM2LQ96N03 204 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 FAIM2Q9BWQ8 316 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 ACTR6Q9GZN1 396 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 FANCFQ9NPI8 374 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 MED11Q9P086 117 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 CPSF2Q9P2I0 782 aaKnown RBP18.06■□□□□ 0.48
TARDBP-228ENST00000629725 SLC12A4Q9UP95 1085 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 EIF3HO15372 352 aaKnown RBP eCLIP18.05■□□□□ 0.48
TARDBP-228ENST00000629725 PHF1O43189 567 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-228ENST00000629725 PLGP00747 810 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-228ENST00000629725 ERCC6LQ2NKX8 1250 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 PPP4R4Q6NUP7 873 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 NPSR1Q6W5P4 371 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 CCDC91Q7Z6B0 441 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 CCDC116Q8IYX3 515 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 GTPBP3Q969Y2 492 aaKnown RBP18.05■□□□□ 0.48
TARDBP-228ENST00000629725 ERP27Q96DN0 273 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 ZBED6CLQ96FA7 236 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-228ENST00000629725 NTMT1Q9BV86 223 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 PRRG4Q9BZD6 226 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 PTGES2Q9H7Z7 377 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 PFDN4Q9NQP4 134 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 SDHAF3Q9NRP4 125 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 UTS2RQ9UKP6 389 aa18.05■□□□□ 0.48
TARDBP-228ENST00000629725 ZSCAN12O43309 604 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 GSTA2P09210 222 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 ACVR1BP36896 505 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 CTBP2P56545 445 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 GALNT1Q10472 559 aaPredicted RBP18.04■□□□□ 0.48
TARDBP-228ENST00000629725 SGO1Q5FBB7 561 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 ADAM5Q6NVV9 412 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 KLC3Q6P597 504 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 BEND4Q6ZU67 534 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 SLC44A2Q8IWA5 706 aaPredicted RBP18.04■□□□□ 0.48
TARDBP-228ENST00000629725 OR4N2Q8NGD1 307 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 RAB3IL1Q8TBN0 382 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 KAT2AQ92830 837 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 FBXW5Q969U6 566 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 GMPPAQ96IJ6 420 aaPredicted RBP18.04■□□□□ 0.48
TARDBP-228ENST00000629725 ELOVL6Q9H5J4 265 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 FOLH1BQ9HBA9 442 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 ZBTB26Q9HCK0 441 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 OR10H1Q9Y4A9 318 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 AP4B1Q9Y6B7 739 aa18.04■□□□□ 0.48
TARDBP-228ENST00000629725 A8MV72 311 aaPredicted RBP18.03■□□□□ 0.48
TARDBP-228ENST00000629725 C2P06681 752 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 SOD3P08294 240 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 IL11P20809 199 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 CDKN1AP38936 164 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 STX5Q13190 355 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 ALKBH2Q6NS38 261 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 CREG2Q8IUH2 290 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 UHMK1Q8TAS1 419 aaKnown RBP18.03■□□□□ 0.48
TARDBP-228ENST00000629725 OR10A4Q9H209 315 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 SLCO5A1Q9H2Y9 848 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 CLEC4AQ9UMR7 237 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 GPR52Q9Y2T5 361 aa18.03■□□□□ 0.48
TARDBP-228ENST00000629725 CCDC188H7C350 402 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 SS18L1O75177 396 aaPredicted RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 KLHL2O95198 593 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 DANCRP0C864 163 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 EIF1AXP47813 144 aaKnown RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 SLC6A8P48029 635 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 TRA2BP62995 288 aaKnown RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 TRAF3Q13114 568 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 CALCOCO2Q13137 446 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 STK32CQ86UX6 486 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 PTGR2Q8N8N7 351 aaPredicted RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 OR9A2Q8NGT5 310 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 LILRB1Q8NHL6 650 aaPredicted RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 PHF21BQ96EK2 531 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 C1GALT1C1Q96EU7 318 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 TACO1Q9BSH4 297 aaKnown RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 FARSBQ9NSD9 589 aaKnown RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 TAS2R9Q9NYW1 312 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 WHRNQ9P202 907 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 ABCG2Q9UNQ0 655 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 LIPT1Q9Y234 373 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 RNF115Q9Y4L5 304 aa18.02■□□□□ 0.48
TARDBP-228ENST00000629725 MAGED1Q9Y5V3 778 aaPredicted RBP18.02■□□□□ 0.48
TARDBP-228ENST00000629725 EIF1AYO14602 144 aaKnown RBP18.01■□□□□ 0.47
TARDBP-228ENST00000629725 CLOCKO15516 846 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 FADS1O60427 444 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 ADAM11O75078 769 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 ESRRBO95718 433 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 PDYNP01213 254 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 FAM157CP0CG43 387 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 PSMB1P20618 241 aaKnown RBP18.01■□□□□ 0.47
TARDBP-228ENST00000629725 CTU2Q2VPK5 515 aaKnown RBP18.01■□□□□ 0.47
TARDBP-228ENST00000629725 GLYR1Q49A26 553 aaPredicted RBP18.01■□□□□ 0.47
TARDBP-228ENST00000629725 GGTA1PQ4G0N0 100 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 MROH9Q5TGP6 573 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 GGNQ86UU5 652 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 DUSP19Q8WTR2 217 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 SMAP2Q8WU79 429 aaPredicted RBP18.01■□□□□ 0.47
TARDBP-228ENST00000629725 MTBPQ96DY7 904 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 GPR78Q96P69 363 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 BRF2Q9HAW0 419 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 STOML1Q9UBI4 398 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms