RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SLC16A8O95907 504 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 SLC35E2BP0CK96 405 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 CXCL12P48061 93 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 METTL2BQ6P1Q9 378 aaKnown RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ENPP6Q6UWR7 440 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 OR6C4Q8NGE1 309 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ISOC1Q96CN7 298 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 APIPQ96GX9 242 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ARL5BQ96KC2 179 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 CDC6Q99741 560 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 SYT3Q9BQG1 590 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 MMP27Q9H306 513 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 KIAA0513O60268 411 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 RBPJQ06330 500 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 OR9A4Q8NGU2 314 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 MS4A4EQ96PG1 132 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 INPP5KQ9BT40 448 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ENKD1Q9H0I2 346 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 NUP205Q92621 2012 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 SIGLEC1Q9BZZ2 1709 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 FAM189A1O60320 539 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ADAP00813 363 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 GDF1P27539 372 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 OR51L1Q8NGJ5 315 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 SAMD8Q96LT4 415 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF317Q96PQ6 595 aaPredicted RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 PHB2Q99623 299 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 TP63Q9H3D4 680 aaPredicted RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 MAGIXQ9H6Y5 334 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ERVK13-1Q9NX77 482 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 EFCAB7A8K855 629 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 SDHDO14521 159 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 CREBL2O60519 120 aaPredicted RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ALDOAP04075 364 aaKnown RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ERP29P30040 261 aaKnown RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 MC3RP41968 323 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 PTH2RP49190 550 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 CSNK2A1P68400 391 aaPredicted RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 CDKN3Q16667 212 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 MAMDC4Q6UXC1 1216 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF551Q7Z340 670 aaPredicted RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 MRPL41Q8IXM3 137 aaKnown RBP11.13□□□□□ -0.63
SHPRH-211ENST00000629427 CCDC71LQ8N9Z2 235 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 CSNK2A3Q8NEV1 391 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 OR56B2PQ8NGI1 322 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 S100PBPQ96BU1 408 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 SULT4A1Q9BR01 284 aa11.13□□□□□ -0.63
SHPRH-211ENST00000629427 TRBV11-1A0A0K0K1C0 115 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 PBX2P40425 430 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 MAP4K2Q12851 820 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 VHLLQ6RSH7 139 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 WDTC1Q8N5D0 677 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 FAM118AQ9NWS6 357 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 TRAPPC13A5PLN9 417 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ANKRD30BLA7E2S9 258 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 SULT2B1O00204 365 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 UBL4AP11441 157 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ARSDP51689 593 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 PRPS1P60891 318 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 SNTB2Q13425 540 aaKnown RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 KANK2Q63ZY3 851 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 LIPIQ6XZB0 460 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 IQCF1Q8N6M8 205 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 USP36Q9P275 1121 aaKnown RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 JRKO75564 520 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 TPPPO94811 219 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 SLC6A8P48029 635 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 GALNT1Q10472 559 aaPredicted RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 RABEPKQ7Z6M1 372 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF695Q8IW36 515 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 SCRN2Q96FV2 425 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 CCDC106Q9BWC9 280 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 EEF1E1-BLOC1S5C9J1V9 151 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 POU3F2P20265 443 aaPredicted RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 HMGCLP35914 325 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 CDKN2CP42773 168 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 EEF1A2Q05639 463 aaKnown RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 MOGQ16653 247 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 HES5Q5TA89 166 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF765Q7L2R6 523 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 DPH1Q9BZG8 443 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 POT1Q9NUX5 634 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 AIG1Q9NVV5 245 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
SHPRH-211ENST00000629427 RGPD1P0DJD0 1748 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 OR52A4PA6NMU1 304 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 RAD1O60671 282 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 LILRB3O75022 631 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 GABBR2O75899 941 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 KNG1P01042 644 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 RAB3BP20337 219 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 CHRNEQ04844 493 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms