RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 UBQLN3Q9H347 655 aa15.3■□□□□ 0.04
UBE3D-208ENST00000626828 TP63Q9H3D4 680 aaPredicted RBP15.3■□□□□ 0.04
UBE3D-208ENST00000626828 ACBD3Q9H3P7 528 aa15.3■□□□□ 0.04
UBE3D-208ENST00000626828 WDR55Q9H6Y2 383 aaPredicted RBP15.3■□□□□ 0.04
UBE3D-208ENST00000626828 SDHAF3Q9NRP4 125 aa15.3■□□□□ 0.04
UBE3D-208ENST00000626828 ZCCHC3Q9NUD5 404 aaKnown RBP15.3■□□□□ 0.04
UBE3D-208ENST00000626828 C15orf41Q9Y2V0 281 aa15.3■□□□□ 0.04
UBE3D-208ENST00000626828 GOLGA8QA0A0J9YX86 632 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 PRSS51A0A1B0GVH4 220 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 GOLGA8OA6NCC3 632 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 GOLGA8NF8WBI6 632 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 RNASET2O00584 256 aaKnown RBP15.29■□□□□ 0.04
UBE3D-208ENST00000626828 SNPHO15079 494 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 ANKRD28O15084 1053 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 HPNP05981 417 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 PTPN6P29350 595 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 KIR3DL1P43629 444 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 SMSP52788 366 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 TOMM20Q15388 145 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 DPY19L1Q2PZI1 675 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 SPDYE7PQ495Y7 208 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 NXNQ6DKJ4 435 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 OR4F3Q6IEY1 312 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 MFSD12Q6NUT3 480 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 BHLHB9Q6PI77 547 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 XKRXQ6PP77 449 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 CD163Q86VB7 1156 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 PLCZ1Q86YW0 608 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 WDSUB1Q8N9V3 476 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 SLC16A11Q8NCK7 471 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 OR56A1Q8NGH5 318 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 NEIL3Q8TAT5 605 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 ACTRT2Q8TDY3 377 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 PHF10Q8WUB8 498 aaKnown RBP15.29■□□□□ 0.04
UBE3D-208ENST00000626828 RNF138Q8WVD3 245 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 DYDC1Q8WWB3 177 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 C16orf58Q96GQ5 468 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 MAELQ96JY0 434 aaKnown RBP15.29■□□□□ 0.04
UBE3D-208ENST00000626828 C7orf26Q96N11 449 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 CXorf36Q9H7Y0 433 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 GALNT9Q9HCQ5 603 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 NEUROD4Q9HD90 331 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 INTS9Q9NV88 658 aaKnown RBP15.29■□□□□ 0.04
UBE3D-208ENST00000626828 GIN1Q9NXP7 522 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 PLEKHB1Q9UF11 243 aaPredicted RBP15.29■□□□□ 0.04
UBE3D-208ENST00000626828 HRH3Q9Y5N1 445 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 LIPGQ9Y5X9 500 aa15.29■□□□□ 0.04
UBE3D-208ENST00000626828 PCNX3Q9H6A9 2034 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 GXYLT2A0PJZ3 443 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 FADS1O60427 444 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 HMGN2P05204 90 aaKnown RBP15.28■□□□□ 0.04
UBE3D-208ENST00000626828 KRT16P08779 473 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 HOXD4P09016 255 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-208ENST00000626828 TRPC1P48995 793 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 WNT3P56703 355 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 HBA1P69905 142 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 EMC4Q5J8M3 183 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 WLSQ5T9L3 541 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 MAMDC2Q7Z304 686 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-208ENST00000626828 MRGPRGQ86SM5 289 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 ZNF808Q8N4W9 903 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-208ENST00000626828 FAM110BQ8TC76 370 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 SFXN5Q8TD22 340 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 PIK3R3Q92569 461 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 ACTRT3Q9BYD9 372 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 PIGUQ9H490 435 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 AIG1Q9NVV5 245 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 FAF1Q9UNN5 650 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-208ENST00000626828 ABCG2Q9UNQ0 655 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 PCDHGB3Q9Y5G1 929 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 WIF1Q9Y5W5 379 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 MED12Q93074 2177 aa15.28■□□□□ 0.04
UBE3D-208ENST00000626828 PHF3Q92576 2039 aaKnown RBP15.27■□□□□ 0.04
UBE3D-208ENST00000626828 ZNF195O14628 629 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 ADAM10O14672 748 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 SCN2BO60939 215 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 SASH3O75995 380 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 TGDSO95455 350 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 ALDOCP09972 364 aaKnown RBP15.27■□□□□ 0.04
UBE3D-208ENST00000626828 ACP2P11117 423 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 AGAP20933 346 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 LCN1P31025 176 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 S100A3P33764 101 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 RFX3P48380 749 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 GAS1P54826 345 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 UFM1P61960 85 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 TP53BP2Q13625 1128 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 LASP1Q14847 261 aaKnown RBP15.27■□□□□ 0.04
UBE3D-208ENST00000626828 DUSP5Q16690 384 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 EXOSC6Q5RKV6 272 aaKnown RBP15.27■□□□□ 0.04
UBE3D-208ENST00000626828 CDC73Q6P1J9 531 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 C3P1Q6ZMU1 363 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 OR5M9Q8NGP3 310 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 ADAMTS15Q8TE58 950 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 ITLN2Q8WWU7 325 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-208ENST00000626828 RMND5BQ96G75 393 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-208ENST00000626828 DMRTA2Q96SC8 542 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 STACQ99469 402 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 YIPF4Q9BSR8 244 aa15.27■□□□□ 0.04
UBE3D-208ENST00000626828 BTBD2Q9BX70 525 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms