RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 WIF1Q9Y5W5 379 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 A0A0G2JMM0 328 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 A0A1W2PPB8 328 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 A0A1W2PRS3 328 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 FAM166BA8MTA8 275 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 KIR3DP1A8MWS1 328 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 G3V3Y1 287 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 SNPHO15079 494 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 CDC40O60508 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 ICOSLGO75144 302 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 CBR3O75828 277 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 HOXD4P09016 255 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 TROVE2P10155 538 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 HPGDP15428 266 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 ATP6V1C1P21283 382 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 UQCRC2P22695 453 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 GDF1P27539 372 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 EVI2BP34910 448 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 RFC3P40938 356 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 MAN2A2P49641 1150 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 AQP5P55064 265 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 KCNK10P57789 538 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 POU6F2P78424 691 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 GAB1Q13480 694 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 LASP1Q14847 261 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 SLC9B1Q4ZJI4 515 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 SPANXN4Q5MJ08 99 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 ANGPTL8Q6UXH0 198 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 MISPQ8IVT2 679 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 ZNF527Q8NB42 609 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 GOT1L1Q8NHS2 421 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 SSC4DQ8WTU2 575 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 RNF138Q8WVD3 245 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 NTNG2Q96CW9 530 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 GIMAP5Q96F15 307 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 CCDC115Q96NT0 180 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 OR52E6Q96RD3 313 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 PANX1Q96RD7 426 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 HOXD1Q9GZZ0 328 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 TSPAN10Q9H1Z9 355 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 EXO5Q9H790 373 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 EXD2Q9NVH0 621 aa12.82□□□□□ -0.36
SNRPA1-216ENST00000626000 HIVEP3Q5T1R4 2406 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 TRGV8A0A0C4DH27 118 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 FAM234BA2RU67 622 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 PINLYPA6NC86 204 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 FIGNL2A6NMB9 653 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 EDF1O60869 148 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 HPNP05981 417 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 PTGER4P35408 488 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 MAGEA5P43359 124 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 IDH3AP50213 366 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 ATP4BP51164 291 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 WNT3P56703 355 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 UFM1P61960 85 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 GANABQ14697 944 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 EXOSC6Q5RKV6 272 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 ATAD3BQ5T9A4 648 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 METTL21CQ5VZV1 264 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 RPTNQ6XPR3 784 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 TRILQ7L0X0 811 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 MAVSQ7Z434 540 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 PLCZ1Q86YW0 608 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 SLC16A11Q8NCK7 471 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 FAM57AQ8TBR7 257 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 MIPOL1Q8TD10 442 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 PHF10Q8WUB8 498 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 OR52B2Q96RD2 323 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 NODALQ96S42 347 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 TBL1XR1Q9BZK7 514 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 TP63Q9H3D4 680 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 CXorf36Q9H7Y0 433 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 PTGES2Q9H7Z7 377 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 PROK2Q9HC23 129 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 UBQLN4Q9NRR5 601 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 MRPS18CQ9Y3D5 142 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 EML6Q6ZMW3 1958 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 SETXQ7Z333 2677 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
SNRPA1-216ENST00000626000 A0A1B0GTH9 108 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 FAM47E-STBD1D6RA91 191 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 SCN2BO60939 215 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 KRT75O95678 551 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 GUSBP08236 651 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 ACP2P11117 423 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 ESRRAP11474 423 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 CYP4B1P13584 511 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 GABRA1P14867 456 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 CHI3L1P36222 383 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 C17orf67Q0P5P2 114 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 DUSP5Q16690 384 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 WLSQ5T9L3 541 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms