RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 DTNBP1Q96EV8 351 aa3.17□□□□□ -1.9
CDR1-202ENST00000625883 HPDLQ96IR7 371 aa3.17□□□□□ -1.9
CDR1-202ENST00000625883 C9orf85Q96MD7 179 aa3.17□□□□□ -1.9
CDR1-202ENST00000625883 GPA33Q99795 319 aa3.17□□□□□ -1.9
CDR1-202ENST00000625883 RBM28Q9NW13 759 aaKnown RBP3.17□□□□□ -1.9
CDR1-202ENST00000625883 FAM120CQ9NX05 1096 aaKnown RBP3.17□□□□□ -1.9
CDR1-202ENST00000625883 PRODH2Q9UF12 536 aa3.17□□□□□ -1.9
CDR1-202ENST00000625883 BLOC1S6Q9UL45 172 aa3.17□□□□□ -1.9
CDR1-202ENST00000625883 NTNG1Q9Y2I2 539 aa3.17□□□□□ -1.9
CDR1-202ENST00000625883 ZSCAN5CA6NGD5 496 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 E9PAM4 449 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 SRPX2O60687 465 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 JCHAINP01591 159 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 TNNI3P19429 210 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 IDSP22304 550 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 DLSTP36957 453 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 OR1D4P47884 311 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 HMGCS2P54868 508 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 HSD17B7P56937 341 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 MICAQ29983 383 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 EIPR1Q53HC9 387 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ASPHD2Q6ICH7 369 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ZNF600Q6ZNG1 722 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 CEACAM19Q7Z692 300 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 SPEM1Q8N4L4 309 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 STKLD1Q8NE28 680 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 DHTKD1Q96HY7 919 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 FOXN4Q96NZ1 517 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 CASD1Q96PB1 797 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 SLC25A51Q9H1U9 297 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 WDR76Q9H967 626 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 UTP6Q9NYH9 597 aaKnown RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 RDH8Q9NYR8 311 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 BARX2Q9UMQ3 279 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 AP4B1Q9Y6B7 739 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 A0A087WWV3 80 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ZSCAN5BA6NJL1 495 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 CCT8L1PA6NM43 557 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 CASKO14936 926 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 PPIHO43447 177 aaKnown RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 RAMP1O60894 148 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 NOL3O60936 208 aaKnown RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 IGFBP1P08833 259 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 ALPIP09923 528 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 HSPA5P11021 654 aaKnown RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 LAMP1P11279 417 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ANXA3P12429 323 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 UQCRBP14927 111 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 SDC1P18827 310 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 XRCC1P18887 633 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 ARHGDIBP52566 201 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 METAP1P53582 386 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 NAPAP54920 295 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ELP6Q0PNE2 266 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 OVGP1Q12889 678 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 SLC22A6Q4U2R8 563 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 SLX4IPQ5VYV7 408 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 GALNT17Q6IS24 598 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ARMCX2Q7L311 632 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 PARGQ86W56 976 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 UNC5CLQ8IV45 518 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 NAXDQ8IW45 347 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 CENPLQ8N0S6 344 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 NANPQ8TBE9 248 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ZBED6CLQ96FA7 236 aaPredicted RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 ELMO2Q96JJ3 720 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 C4orf36Q96KX1 117 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 TMEM121Q9BTD3 319 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 COMMD4Q9H0A8 199 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 TIGARQ9NQ88 270 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 CGNQ9P2M7 1197 aaKnown RBP3.16□□□□□ -1.9
CDR1-202ENST00000625883 LAMP5Q9UJQ1 280 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 DUSP12Q9UNI6 340 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 CHMP2BQ9UQN3 213 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 RNF6Q9Y252 685 aa3.16□□□□□ -1.9
CDR1-202ENST00000625883 ESYT2A0FGR8 921 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 NDC80O14777 642 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 TSPY4P0CV99 314 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 TSPY10P0CW01 314 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 HTR2AP28223 471 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 RPL4P36578 427 aaKnown RBP3.15□□□□□ -1.91
CDR1-202ENST00000625883 ALDH3B2P48448 385 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 ACADVLP49748 655 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 IST1P53990 364 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 SLC8A3P57103 927 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 LMO4P61968 165 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 PLOD1Q02809 727 aaPredicted RBP3.15□□□□□ -1.91
CDR1-202ENST00000625883 RUNX3Q13761 415 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 SLC10A1Q14973 349 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 LGSNQ5TDP6 509 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 SLC25A24Q6NUK1 477 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 STAC2Q6ZMT1 411 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 CYS1Q717R9 158 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 CENPUQ71F23 418 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 AGAP11Q8TF27 550 aa3.15□□□□□ -1.91
CDR1-202ENST00000625883 RAB7BQ96AH8 199 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms