RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MYO1GB0I1T2 1018 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 PRRG2O14669 202 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 OR10H2O60403 315 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 ANP32DO95626 131 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 ABCB1P08183 1280 aaPredicted RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 ABOP16442 354 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 CNR1P21554 472 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 COL8A1P27658 744 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 NTSP30990 170 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 PTGER1P34995 402 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 DCTP40126 519 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 SOX3P41225 446 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 GSK3BP49841 420 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 SMSP52788 366 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 EEFSECP57772 596 aaKnown RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 ELF3P78545 371 aaPredicted RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 LRRC74AQ0VAA2 488 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 HSPB3Q12988 150 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 CEBPEQ15744 281 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 SAMD4BQ5PRF9 694 aaKnown RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 C16orf47Q6ZP98 133 aaPredicted RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 MRGPRGQ86SM5 289 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 DND1Q8IYX4 353 aaKnown RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 CLEC4FQ8N1N0 589 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 NATD1Q8N6N6 113 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 VPS37AQ8NEZ2 397 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 SLC22A8Q8TCC7 542 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 WDR60Q8WVS4 1066 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 ITLN2Q8WWU7 325 aaPredicted RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 OR5P2Q8WZ92 322 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 RIT1Q92963 219 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 ZNF681Q96N22 645 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 GLIPR2Q9H4G4 154 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 CXorf36Q9H7Y0 433 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 LIN28AQ9H9Z2 209 aaKnown RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 ACSS1Q9NUB1 689 aaPredicted RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 ENTPD4Q9Y227 616 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 DIDO1Q9BTC0 2240 aaKnown RBP11.65□□□□□ -0.54
PNKP-217ENST00000625216 NBPF19A0A087WUL8 3843 aa11.65□□□□□ -0.54
PNKP-217ENST00000625216 HSD17B1P14061 328 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 TCN1P20061 433 aaPredicted RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 ME2P23368 584 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 MSX2P35548 267 aaPredicted RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 SOAT1P35610 550 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 FEN1P39748 380 aaKnown RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 LIPEQ05469 1076 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 KPNB1Q14974 876 aaKnown RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 ZNF621Q6ZSS3 439 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 SLC29A4Q7RTT9 530 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 CHERPQ8IWX8 916 aaKnown RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 OR2M7Q8NG81 312 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 OR4K14Q8NGD5 310 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 OR5AK3PQ8NH89 298 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 ZFP90Q8TF47 636 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 ZBED6CLQ96FA7 236 aaPredicted RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 AMDHD1Q96NU7 426 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 FAM173AQ9BQD7 235 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 SLC35A5Q9BS91 424 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 DENND2DQ9H6A0 471 aaPredicted RBP11.64□□□□□ -0.55
PNKP-217ENST00000625216 RUBCNLQ9H714 662 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 TAS2R9Q9NYW1 312 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 TINAGQ9UJW2 476 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 POMPQ9Y244 141 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 MEMO1Q9Y316 297 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 L3MBTL1Q9Y468 752 aa11.64□□□□□ -0.55
PNKP-217ENST00000625216 E9PLN8 166 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 H0YHG0 523 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 ACOT7O00154 380 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 CLIC1O00299 241 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 ACOT8O14734 319 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 HNRNPRO43390 633 aaKnown RBP11.63□□□□□ -0.55
PNKP-217ENST00000625216 HS6ST1O60243 411 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 CIB2O75838 187 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 P04436 131 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 CSNK2A2P19784 350 aaPredicted RBP11.63□□□□□ -0.55
PNKP-217ENST00000625216 PTGS2P35354 604 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 GZMMP51124 257 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 NCBP2P52298 156 aaKnown RBP eCLIP11.63□□□□□ -0.55
PNKP-217ENST00000625216 MVDP53602 400 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 MANFP55145 182 aaKnown RBP11.63□□□□□ -0.55
PNKP-217ENST00000625216 SLC37A1P57057 533 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 GPR85P60893 370 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 PPIAP62937 165 aaKnown RBP11.63□□□□□ -0.55
PNKP-217ENST00000625216 MS4A2Q01362 244 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 ZNF267Q14586 743 aaPredicted RBP11.63□□□□□ -0.55
PNKP-217ENST00000625216 MLC1Q15049 377 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 LTB4RQ15722 352 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 ZNF791Q3KP31 576 aaPredicted RBP11.63□□□□□ -0.55
PNKP-217ENST00000625216 CMPK2Q5EBM0 449 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 ZNF787Q6DD87 383 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 ARHGAP11AQ6P4F7 1023 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 RNF111Q6ZNA4 994 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 DGAT2L6Q6ZPD8 337 aa11.63□□□□□ -0.55
PNKP-217ENST00000625216 NET1Q7Z628 596 aaPredicted RBP11.63□□□□□ -0.55
PNKP-217ENST00000625216 SLC22A16Q86VW1 577 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms