RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 DOK4Q8TEW6 326 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 ANKRD9Q96BM1 317 aaPredicted RBP18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 STACQ99469 402 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 MCHR1Q99705 422 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 PALMDQ9NP74 551 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 TAS2R16Q9NYV7 291 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 TVP23BQ9NYZ1 205 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 CLCA2Q9UQC9 943 aa18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 RPL36Q9Y3U8 105 aaKnown RBP18.39■□□□□ 0.53
PCDHB11-202ENST00000624887 TRIOO75962 3097 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 A0A1W2PR77 199 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 FAM170BA6NMN3 283 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 METTL12A8MUP2 240 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 RDH16O75452 317 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 NME1P15531 152 aaKnown RBP18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 SERPINB10P48595 397 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 EEF1A1P68104 462 aaKnown RBP18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 HOXC5Q00444 222 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 TSPAN31Q12999 210 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 FZD5Q13467 585 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 ANKDD1AQ495B1 522 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 EIPR1Q53HC9 387 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 ARMCX4Q5H9R4 360 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 CCNJQ5T5M9 372 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 ZNF730Q6ZMV8 503 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 PLEKHM3Q6ZWE6 761 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 KIF18BQ86Y91 864 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 MCATQ8IVS2 390 aaKnown RBP18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 AVL9Q8NBF6 648 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 FNDC8Q8TC99 324 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 CTHRC1Q96CG8 243 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 SH3YL1Q96HL8 342 aaPredicted RBP18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 PLEKHA8Q96JA3 519 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 SAP130Q9H0E3 1048 aa18.38■□□□□ 0.53
PCDHB11-202ENST00000624887 PRKYO43930 277 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 STX11O75558 287 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 OR5F1O95221 314 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 NADKO95544 446 aaPredicted RBP18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 CTSBP07858 339 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 RPS4Y1P22090 263 aaKnown RBP18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 GADD45AP24522 165 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 CD38P28907 300 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 OPRL1P41146 370 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 MAP3K8P41279 467 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 RGS6P49758 472 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 CLK1P49759 484 aaKnown RBP18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 SMSP52788 366 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 RAB15P59190 212 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 EFNB1P98172 346 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 NCF4Q15080 339 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 DECR1Q16698 335 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 PRTGQ2VWP7 1150 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 DCST2Q5T1A1 773 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 ACSM5Q6NUN0 579 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 ZNF619Q8N2I2 560 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 ARL14Q8N4G2 192 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 DEFB123Q8N688 67 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 OR9A4Q8NGU2 314 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 ACOT11Q8WXI4 607 aaPredicted RBP18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 ZHX1-C8orf76Q96EF9 292 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 HSPBAP1Q96EW2 488 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 ALOXE3Q9BYJ1 711 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 TMEM131Q92545 1883 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 SLC9B1P1A6NJY1 282 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 RPLP0P05388 317 aaKnown RBP18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 CT62P0C5K7 136 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 SLC35E2P0CK97 266 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 UGT2B10P36537 528 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 OMPP47874 163 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 ZNF91Q05481 1191 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 GPR68Q15743 365 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 RRM2BQ7LG56 351 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 DEFB119Q8N690 84 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 TOR1AIP2Q8NFQ8 470 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 OR5M11Q96RB7 305 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 UCK1Q9HA47 277 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 OSGIN1Q9UJX0 560 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 CORINQ9Y5Q5 1042 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 PMF1-BGLAPU3KQ54 211 aa18.37■□□□□ 0.53
PCDHB11-202ENST00000624887 CENPVL1A0A0U1RR11 272 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 CHST10O43529 356 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 TLX2O43763 284 aaPredicted RBP18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 SRPX2O60687 465 aaPredicted RBP18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 AK1P00568 194 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 THY1P04216 161 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 DBTP11182 482 aaKnown RBP18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 TGFBR1P36897 503 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 TUBA1BP68363 451 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 EXOSC7Q15024 291 aaKnown RBP18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 RASSF6Q6ZTQ3 369 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 TUBA1AQ71U36 451 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 GDF7Q7Z4P5 450 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 MRGPREQ86SM8 312 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 ZNF554Q86TJ5 538 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 ADCK1Q86TW2 530 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 GKN2Q86XP6 184 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 NKAIN4Q8IVV8 208 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 COX18Q8N8Q8 333 aa18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 WDR36Q8NI36 951 aaKnown RBP18.36■□□□□ 0.53
PCDHB11-202ENST00000624887 PIGXQ8TBF5 258 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms