RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MMP25Q9NPA2 562 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 DCAF13Q9NV06 445 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 WDR45Q9Y484 360 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 V9GYQ6 96 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 DCHS1Q96JQ0 3298 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 NINQ8N4C6 2090 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 TCRBV5S2A0A599 114 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 TCRBV3S1A0A5B6 114 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 MASP2O00187 686 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 FCMRO60667 390 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 STX11O75558 287 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 ZNF682O95780 498 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 IFNA14P01570 189 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 OPN1SWP03999 348 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 SRSF6Q13247 344 aaKnown RBP16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 DECR1Q16698 335 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 CRB2Q5IJ48 1285 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 FRRS1Q6ZNA5 592 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 C17orf47Q8NEP4 570 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 OR52E4Q8NGH9 312 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 FGF11Q92914 225 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 TAMM41Q96BW9 452 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 COL21A1Q96P44 957 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 LMF1Q96S06 567 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 ZNF350Q9GZX5 532 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 FBXO34Q9NWN3 711 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 RPS6KA6Q9UK32 745 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 MKLN1Q9UL63 735 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 AKAP13Q12802 2813 aa16.47■□□□□ 0.23
PTCHD3-202ENST00000622555 ACOX3O15254 700 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 ZIC2O95409 532 aaPredicted RBP16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 IGKV1D-16P01601 117 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 C8BP07358 591 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 ICAM2P13598 275 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 ATP6V1C1P21283 382 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 CRYBA2P53672 197 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 RHDQ02161 417 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 GPR68Q15743 365 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 CYBRD1Q53TN4 286 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 TYW3Q6IPR3 259 aaKnown RBP16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 HMGN2P46Q86SG4 172 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 PRR22Q8IZ63 422 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 EID3Q8N140 333 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 TMBIM1Q969X1 311 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 TP53INP1Q96A56 240 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 HSPBAP1Q96EW2 488 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 G6PC3Q9BUM1 346 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 ADPRHL2Q9NX46 363 aa16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 SAMD4AQ9UPU9 718 aaKnown RBP16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 GPC6Q9Y625 555 aaPredicted RBP16.46■□□□□ 0.23
PTCHD3-202ENST00000622555 WWP2O00308 870 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 TO15178 435 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SERPINB7O75635 380 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ETS2P15036 469 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ENPP6Q6UWR7 440 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 C16orf47Q6ZP98 133 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 CBLL1Q75N03 491 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ARMC8Q8IUR7 673 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ZNF619Q8N2I2 560 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 OR10Q1Q8NGQ4 319 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 FAM110BQ8TC76 370 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 KCNE4Q8WWG9 221 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 RNF145Q96MT1 663 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 QRSL1Q9H0R6 528 aaKnown RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 MTHFD2LQ9H903 347 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 POLE3Q9NRF9 147 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 OLAHQ9NV23 265 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 MRTO4Q9UKD2 239 aaKnown RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 DSPPQ9NZW4 1301 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 EXPH5Q8NEV8 1989 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 DOCK10Q96BY6 2186 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 DHRS12A0PJE2 317 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 H3BNX3 289 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SUV39H1O43463 412 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 PRKD3O94806 890 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ALPPP05187 535 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ITGAMP11215 1152 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ACADSP16219 412 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 PSMA4P25789 261 aaKnown RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 NRG3P56975 720 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SESN3P58005 492 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 PLCXD2Q0VAA5 305 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 TAF11Q15544 211 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 FLYWCH1Q4VC44 716 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 TCTN3Q6NUS6 607 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 EIF3MQ7L2H7 374 aaKnown RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ZAR1Q86SH2 424 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SLC34A3Q8N130 599 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 FAM86B1Q8N7N1 296 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SMYD1Q8NB12 490 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 GOLM1Q8NBJ4 401 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 PYDC1Q8WXC3 89 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 DNAJC9Q8WXX5 260 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 EFHD2Q96C19 240 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 TPD52L3Q96J77 140 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SPATA5L1Q9BVQ7 753 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SAP130Q9H0E3 1048 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 CACYBPQ9HB71 228 aaKnown RBP16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 SEC14L3Q9UDX4 400 aa16.45■□□□□ 0.22
PTCHD3-202ENST00000622555 ANAPC2Q9UJX6 822 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms