RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 WRBO00258 174 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 CHADO15335 359 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 HSF2BPO75031 334 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 NIPSNAP2O75323 286 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 TRIM3O75382 744 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 CRCPO75575 148 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 TOM1L1O75674 476 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 PGLSO95336 258 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 MOCS2O96007 188 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 ANKRD34CP0C6C1 535 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 CALCBP10092 127 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 DRD5P21918 477 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 CYP2F1P24903 491 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SERPINB6P35237 376 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 MATKP42679 507 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 OR3A3P47888 321 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 MTTPP55157 894 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 PRMT2P55345 433 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 PEX3P56589 373 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SRSF5Q13243 272 aaKnown RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 COTL1Q14019 142 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 WDR43Q15061 677 aaKnown RBP eCLIP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 AANATQ16613 207 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 ECSCRQ19T08 205 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 Q3ZCU0 254 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 IFI44LQ53G44 452 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SPOUT1Q5T280 376 aaKnown RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 ARMC12Q5T9G4 340 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SULT1C3Q6IMI6 304 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 PHLDB2Q86SQ0 1253 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SERINC5Q86VE9 423 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 ZDHHC21Q8IVQ6 265 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 EFCAB13Q8IY85 973 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 TDHQ8IZJ6 230 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 FADS6Q8N9I5 356 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 CLEC1AQ8NC01 280 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 FAM71CQ8NEG0 241 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 TMEM185AQ8NFB2 350 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 BBS1Q8NFJ9 593 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 OR56B1Q8NGI3 324 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 OR1B1Q8NGR6 318 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 CKAP2Q8WWK9 683 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SELENOMQ8WWX9 145 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 RLN3Q8WXF3 142 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SMPDL3AQ92484 453 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 STARD8Q92502 1023 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 ISG20Q96AZ6 181 aaKnown RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 EFHD2Q96C19 240 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 SLC41A3Q96GZ6 507 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 RPGRIP1Q96KN7 1286 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 TSSK2Q96PF2 358 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 RCHY1Q96PM5 261 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 NSRP1Q9H0G5 558 aaKnown RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 LIME1Q9H400 295 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 DCTPP1Q9H773 170 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 AGPAT3Q9NRZ7 376 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 NUDT15Q9NV35 164 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 ETNK2Q9NVF9 386 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 CD300AQ9UGN4 299 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 NOCTQ9UK39 431 aaKnown RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 KIAA1257Q9ULG3 409 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 KCNK6Q9Y257 313 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF256Q9Y2P7 627 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 KLF2Q9Y5W3 355 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-229ENST00000621897 PARD3Q8TEW0 1356 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 PHLPP2Q6ZVD8 1323 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 IGLON5A6NGN9 336 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 K7EQM0 130 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 FBP2O00757 339 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 XPO1O14980 1071 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 ALOX15BO15296 676 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF253O75346 499 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 NME6O75414 186 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 GNA14O95837 355 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 IL1BP01584 269 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 OPN1LWP04000 364 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 CRYGCP07315 174 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 IQCF3P0C7M6 154 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 UQCRFS1P1P0C7P4 283 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 CLUP10909 449 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 GCFC2P16383 781 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 CD1BP29016 333 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SRD5A2P31213 254 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 OR3A1P47881 315 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SLC11A1P49279 550 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SUCLG1P53597 346 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 AIF1P55008 147 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SRP54P61011 504 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 RPL23AP62750 156 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 UBE2IP63279 158 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 PDK4Q16654 411 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 KLHL40Q2TBA0 621 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 IQCCQ4KMZ1 466 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 BCL7AQ4VC05 210 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 TMEM41BQ5BJD5 291 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 LINC00242Q5T6M2 205 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 KCTD11Q693B1 232 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 TXNRD3NBQ6F5E7 133 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 NEPROQ6NW34 567 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms