RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 OR8J1Q8NGP2 316 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 PROKR1Q8TCW9 393 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CCDC74AQ96AQ1 378 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 BMFQ96LC9 184 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 C1QTNF2Q9BXJ5 285 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 POLEQ07864 2286 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 OR5K3A6NET4 321 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 FAM171A2A8MVW0 826 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 ZNF879B4DU55 563 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 ZNF878C9JN71 531 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 H0YIV9 168 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 RNASET2O00584 256 aaKnown RBP8.7□□□□□ -1.02
GGA3-223ENST00000621870 MYF5P13349 255 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 NPPBP16860 134 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 ENTPD1P49961 510 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CRISP1P54107 249 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 INHBCP55103 352 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CSNK1G2P78368 415 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 NPRL3Q12980 569 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 KCNAB1Q14722 419 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 COQ5Q5HYK3 327 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 QSOX2Q6ZRP7 698 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 MSANTD1Q6ZTZ1 278 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 METTL4Q8N3J2 472 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CNEP1R1Q8N9A8 125 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SYT14Q8NB59 555 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 RAB2BQ8WUD1 216 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 NXPE2Q96DL1 559 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 SLC41A3Q96GZ6 507 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 CRELD1Q96HD1 420 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 EDEM2Q9BV94 578 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 VN1R3Q9BXE9 311 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 DPH1Q9BZG8 443 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 HHATLQ9HCP6 504 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 ANKRD10Q9NXR5 420 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 GPR52Q9Y2T5 361 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 GPR45Q9Y5Y3 372 aa8.7□□□□□ -1.02
GGA3-223ENST00000621870 hCG_1807616A0A1W2PRN6 198 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 LSM1O15116 133 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 ZNF749O43361 778 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 PRKRAO75569 313 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 HSD17B1P14061 328 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 GCAP28676 217 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 MAGEA3P43357 314 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 RPL34P49207 117 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 GPLD1P80108 840 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ECH1Q13011 328 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 NKAIN1Q4KMZ8 207 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ZNF595Q8IYB9 648 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ANKFN1Q8N957 763 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 FBXO27Q8NI29 283 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 CNIH3Q8TBE1 160 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 NARS2Q96I59 477 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 PHF12Q96QT6 1004 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 BARD1Q99728 777 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 ZNF559Q9BR84 538 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 SEMA6CQ9H3T2 930 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 PDFQ9HBH1 243 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 SPHK1Q9NYA1 384 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 SLC23A2Q9UGH3 650 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 CARD8Q9Y2G2 431 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 CACNA1BQ00975 2339 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ACOX3O15254 700 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 AP1G1O43747 822 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 UBL4AP11441 157 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 GPX3P22352 226 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 GADD45AP24522 165 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 NOVA1P51513 510 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 KIAA1024LP59773 190 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 EEF1A1P68104 462 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 DMWDQ09019 674 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 BNIP3Q12983 259 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 CLCA4Q14CN2 919 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 MANEAQ5SRI9 462 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 DCST2Q5T1A1 773 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 RAB11FIP2Q7L804 512 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 OR4C15Q8NGM1 316 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 PLA2G2FQ9BZM2 168 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 NRSN2Q9GZP1 204 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 R4GN57 208 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ECM29Q5VYK3 1845 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 RRP8O43159 456 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 OR2T1O43869 369 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 FUT1P19526 365 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ARNTP27540 789 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 MS4A2Q01362 244 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 CHRNEQ04844 493 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ATP6AP1Q15904 470 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 BCL7AQ4VC05 210 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 PAMR1Q6UXH9 720 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 IQCF2Q8IXL9 164 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 BOLLQ8N9W6 283 aaKnown RBP8.69□□□□□ -1.02
GGA3-223ENST00000621870 MFSD9Q8NBP5 474 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 OR9Q2Q8NGE9 314 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 PGAM5Q96HS1 289 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 METTL2AQ96IZ6 378 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms