RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 GADD45AP24522 165 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 HOXA9P31269 272 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 LIPAP38571 399 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 MAGEA8P43361 318 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 XCR1P46094 333 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ABATP80404 500 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 HSF2Q03933 536 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 CRYZQ08257 329 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 DMPKQ09013 629 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 TDGQ13569 410 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 PROX2Q3B8N5 592 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 IQCCQ4KMZ1 466 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 SOWAHCQ53LP3 525 aaPredicted RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 PLEKHG7Q6ZR37 379 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 CBLL1Q75N03 491 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 SHFQ7M4L6 423 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 PTOV1Q86YD1 416 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 RCBTB1Q8NDN9 531 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 CCDC54Q8NEL0 328 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 C1orf216Q8TAB5 229 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 DYNC2LI1Q8TCX1 351 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 YIPF6Q96EC8 236 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 CCDC120Q96HB5 630 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 GNG8Q9UK08 70 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 NDRG4Q9ULP0 352 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 MYOFQ9NZM1 2061 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 hCG_1807616A0A1W2PRN6 198 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 CCDC182A6NF36 153 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 VEGFDO43915 354 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ACPPP15309 386 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 HOXB6P17509 224 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 CELP19835 753 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 CBX5P45973 191 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 OR2B6P58173 313 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 MVKQ03426 396 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 GAS6Q14393 721 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 IRF4Q15306 451 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 TCTN1Q2MV58 587 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 LRIT3Q3SXY7 679 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF404Q494X3 552 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 REEP3Q6NUK4 255 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 TMEM151BQ8IW70 566 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ENTHD1Q8IYW4 607 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 OR5D16Q8NGK9 328 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 OR9A4Q8NGU2 314 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 PHOSPHO2Q8TCD6 241 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 RFKQ969G6 155 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 POP5Q969H6 163 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF566Q969W8 418 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ERMAPQ96PL5 475 aaPredicted RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 RBP7Q96R05 134 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF300Q96RE9 604 aaPredicted RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 MAP3K3Q99759 626 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 FAM120CQ9NX05 1096 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 GPR83Q9NYM4 423 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 PPP4R1LQ9P1A2 415 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 MYEF2Q9P2K5 600 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 UPB1Q9UBR1 384 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 TBC1D24Q9ULP9 559 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 RNF6Q9Y252 685 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 TMA7Q9Y2S6 64 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 NAALAD2Q9Y3Q0 740 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 PMF1-BGLAPU3KQ54 211 aa7.81□□□□□ -1.16
PTPDC1-204ENST00000620992 GABRR3A8MPY1 467 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 LINC01565O15544 149 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 PRKNO60260 465 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 SYPP08247 313 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 STSP08842 583 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF20P17024 532 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 CDH11P55287 796 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 ADAM8P78325 824 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 EIPR1Q53HC9 387 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 C6orf132Q5T0Z8 1188 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 ABHD17BQ5VST6 288 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 CCDC71Q8IV32 467 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 CBARPQ8N350 705 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 SLC5A8Q8N695 610 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 RASGEF1AQ8N9B8 481 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 SYT14Q8NB59 555 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 NSMAFQ92636 917 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 DAZLQ92904 295 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 POLDIP3Q9BY77 421 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 COMMD4Q9H0A8 199 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 RNF167Q9H6Y7 350 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 CUEDC1Q9NWM3 386 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 CRNNQ9UBG3 495 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 TNFRSF10DQ9UBN6 386 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 TMEM202A6NGA9 273 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 GPX2P18283 190 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 EDNRAP25101 427 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 TIA1P31483 386 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 OR3A3P47888 321 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 OR3A2P47893 321 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 MAN2A2P49641 1150 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 EMP2P54851 167 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 CXCR4P61073 352 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 TFF2Q03403 129 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 GRM7Q14831 915 aa7.8□□□□□ -1.16
PTPDC1-204ENST00000620992 EXOSC7Q15024 291 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms