RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ZNF687Q8N1G0 1237 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ARRDC1Q8N5I2 433 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SLC5A8Q8N695 610 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SYT14Q8NB59 555 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 BEST4Q8NFU0 473 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 THAP6Q8TBB0 222 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 LINC01599Q8WXQ3 324 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CMTM3Q96MX0 182 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 C2orf88Q9BSF0 95 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CACNG6Q9BXT2 260 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 IPPKQ9H8X2 491 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PRDM5Q9NQX1 630 aaPredicted RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 ENAMQ9NRM1 1142 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 NLE1Q9NVX2 485 aaPredicted RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 TMEM248Q9NWD8 314 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CFAP97Q9P2B7 532 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 AFF4Q9UHB7 1163 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 SF3B6Q9Y3B4 125 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 TMEM265A0A087WTH1 108 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 TMEM218A2RU14 115 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SMIM30A4D0T7 59 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 AGAP14A8MT82 685 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 M0R129 80 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 DLL1O00548 723 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 RAMP2O60895 175 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SCN2BO60939 215 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 FZD7O75084 574 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ICOSLGO75144 302 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SC5DO75845 299 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 HPXP02790 462 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 APEHP13798 732 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 HOXB9P17482 250 aaPredicted RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 LAG3P18627 525 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CD53P19397 219 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PAX6P26367 422 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ACVRL1P37023 503 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SEC61A1P61619 476 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 RAB33AQ14088 237 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SLC36A2Q495M3 483 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CLLU1OSQ5K130 101 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 FAM122BQ7Z309 247 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 LAS2Q8IYD9 372 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PIANPQ8IYJ0 282 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CARFQ8N187 725 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 TTC9BQ8N6N2 239 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 OR10G2Q8NGC3 310 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 OR10K1Q8NGX5 313 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 RPLP0P6Q8NHW5 317 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CD200R1Q8TD46 325 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 TCTEX1D2Q8WW35 142 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SLC39A7Q92504 469 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 DEFB118Q96PH6 123 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 EGLN1Q9GZT9 426 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 DHCR7Q9UBM7 475 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 E9PI62 339 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ZNF593O00488 134 aaPredicted RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 CASKO14936 926 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 RGS14O43566 566 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 TSPAN3O60637 253 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PRAF2O60831 178 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 APBB3O95704 486 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 OTCP00480 354 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SAGP10523 405 aaPredicted RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 TIMP2P16035 220 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ELK1P19419 428 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 KDELR2P33947 212 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 RFX3P48380 749 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ZNF140P52738 457 aaPredicted RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 TBX4P57082 545 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PPIGQ13427 754 aaKnown RBP eCLIP9.76□□□□□ -0.85
VPS11-207ENST00000620429 MS4A13Q5J8X5 152 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 GPRC6AQ5T6X5 926 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PSAPL1Q6NUJ1 521 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PTCHD4Q6ZW05 846 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 GLT6D1Q7Z4J2 308 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SERPINA11Q86U17 422 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 NAGSQ8N159 534 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ACOT12Q8WYK0 555 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 IGSF8Q969P0 613 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 MTFMTQ96DP5 389 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 SUSD3Q96L08 255 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SMIM14Q96QK8 99 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 SPSB2Q99619 263 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 MAPKAP1Q9BPZ7 522 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 C7orf50Q9BRJ6 194 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 TMPRSS5Q9H3S3 457 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 PIGMQ9H3S5 423 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 CYSLTR2Q9NS75 346 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 NUDT4Q9NZJ9 180 aa9.76□□□□□ -0.85
VPS11-207ENST00000620429 ZNF624Q9P2J8 865 aaPredicted RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 CARHSP1Q9Y2V2 147 aaKnown RBP9.76□□□□□ -0.85
VPS11-207ENST00000620429 IQCF5A8MTL0 148 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 C1orf196B1AJZ1 125 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 TXNL1O43396 289 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 PRKYO43930 277 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 BRINP1O60477 761 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 CDC123O75794 336 aaPredicted RBP9.75□□□□□ -0.85
VPS11-207ENST00000620429 KRT33AO76009 404 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 OR2A4O95047 310 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms