RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 TBC1D3HP0C7X1 549 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 GABRA5P31644 462 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 IFNGR2P38484 337 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 OMPP47874 163 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 PPP2CBP62714 309 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 PPP2CAP67775 309 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 CHRNEQ04844 493 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 TRAM2Q15035 370 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 C18orf63Q68DL7 685 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 TBC1D3GQ6DHY5 549 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 TBC1D3CQ6IPX1 549 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 VRK2Q86Y07 508 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 GATAD2AQ86YP4 633 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 TBC1D3Q8IZP1 549 aaPredicted RBP28.13■■■□□ 2.09
KHSRP-213ENST00000619396 SLC38A2Q96QD8 506 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 C11orf54Q9H0W9 315 aaPredicted RBP28.13■■■□□ 2.09
KHSRP-213ENST00000619396 SYNPO2LQ9H987 977 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 CNIH4Q9P003 139 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 SLC17A4Q9Y2C5 497 aa28.13■■■□□ 2.09
KHSRP-213ENST00000619396 GPR89AB7ZAQ6 455 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 GPR89BP0CG08 455 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 TRAPPC2P0DI81 140 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 TRAPPC2BP0DI82 140 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 ADPRHP54922 357 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 SHFQ7M4L6 423 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 RDH10Q8IZV5 341 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 OR52P1PQ8NH57 321 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 NR4A3Q92570 626 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 KIAA1143Q96AT1 154 aaPredicted RBP28.12■■■□□ 2.09
KHSRP-213ENST00000619396 MRPS30Q9NP92 439 aaKnown RBP28.12■■■□□ 2.09
KHSRP-213ENST00000619396 SNX7Q9UNH6 387 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 LIPT1Q9Y234 373 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 CA5BQ9Y2D0 317 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 SMIM30A4D0T7 59 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 PRICKLE3O43900 615 aaPredicted RBP28.12■■■□□ 2.09
KHSRP-213ENST00000619396 MLLT1Q03111 559 aaPredicted RBP28.12■■■□□ 2.09
KHSRP-213ENST00000619396 SLC48A1Q6P1K1 146 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 TIMM29Q9BSF4 260 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 APOOQ9BUR5 198 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 FGF22Q9HCT0 170 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 TOR4AQ9NXH8 423 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 SPHK1Q9NYA1 384 aa28.12■■■□□ 2.09
KHSRP-213ENST00000619396 EMC8O43402 210 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 TMCC2O75069 709 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 F3P13726 295 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 TRHRP34981 398 aaPredicted RBP28.11■■■□□ 2.09
KHSRP-213ENST00000619396 SLC35F1Q5T1Q4 408 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 FBXL6Q8N531 539 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 FAM46AQ96IP4 442 aaKnown RBP28.11■■■□□ 2.09
KHSRP-213ENST00000619396 MDC1Q14676 2089 aaKnown RBP28.11■■■□□ 2.09
KHSRP-213ENST00000619396 CPSF4LA6NMK7 179 aaKnown RBP28.11■■■□□ 2.09
KHSRP-213ENST00000619396 GUCY1B2O75343 617 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 CSNK2A2P19784 350 aaPredicted RBP28.11■■■□□ 2.09
KHSRP-213ENST00000619396 TEAD1P28347 426 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 CLDN2P57739 230 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 PDZK1Q5T2W1 519 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 POGLUT1Q8NBL1 392 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 OR2L5Q8NG80 312 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 ANKRA2Q9H9E1 313 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 ENTPD4Q9Y227 616 aa28.11■■■□□ 2.09
KHSRP-213ENST00000619396 TRDV1A0A1B0GX56 115 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 FAM172BPA6NC97 362 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 TFECO14948 347 aaPredicted RBP28.1■■■□□ 2.09
KHSRP-213ENST00000619396 LALBAP00709 142 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 ALPPP05187 535 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 PEBP1P30086 187 aaKnown RBP28.1■■■□□ 2.09
KHSRP-213ENST00000619396 AADACL4Q5VUY2 407 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 TMEM184AQ6ZMB5 413 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 ANKRD19PQ9H560 264 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 CLEC1BQ9P126 229 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 GSTK1Q9Y2Q3 226 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 POM121BA6NF01 834 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 PRR19A6NJB7 356 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 PLA2G10O15496 165 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 CERS1P27544 350 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 NTSR1P30989 418 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 SLC1A3P43003 542 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 TNFRSF4P43489 277 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 PRR5P85299 388 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 ST3GAL3Q11203 375 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 COL9A2Q14055 689 aaPredicted RBP28.1■■■□□ 2.09
KHSRP-213ENST00000619396 CLEC12AQ5QGZ9 265 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 UTS2BQ765I0 119 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 CAMKK1Q8N5S9 505 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 NUP43Q8NFH3 380 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 OR4Q3Q8NH05 313 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 AP3S1Q92572 193 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 MRPL38Q96DV4 380 aaKnown RBP28.1■■■□□ 2.09
KHSRP-213ENST00000619396 ELP4Q96EB1 424 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 ZNF681Q96N22 645 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 SOSTQ9BQB4 213 aa28.1■■■□□ 2.09
KHSRP-213ENST00000619396 DDX28Q9NUL7 540 aaKnown RBP28.1■■■□□ 2.09
KHSRP-213ENST00000619396 A0A1W2PQF6 199 aa28.09■■■□□ 2.09
KHSRP-213ENST00000619396 A8MV72 311 aaPredicted RBP28.09■■■□□ 2.09
KHSRP-213ENST00000619396 B4DXG7 233 aa28.09■■■□□ 2.09
KHSRP-213ENST00000619396 EML2O95834 649 aa28.09■■■□□ 2.09
KHSRP-213ENST00000619396 SOX18P35713 384 aa28.09■■■□□ 2.09
KHSRP-213ENST00000619396 AHRP35869 848 aa28.09■■■□□ 2.09
KHSRP-213ENST00000619396 MC3RP41968 323 aa28.09■■■□□ 2.09
KHSRP-213ENST00000619396 ARFIP1P53367 373 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms