RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 ERVK-19Q9WJR5 959 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 SCN8AQ9UQD0 1980 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 RNASET2O00584 256 aaKnown RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 PRAMEF2O60811 474 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 OPN1SWP03999 348 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 RLN2P04090 185 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 GLAP06280 429 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 IFNGR1P15260 489 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 EPORP19235 508 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 PVALBP20472 110 aaPredicted RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 CDKN1CP49918 316 aaPredicted RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 YBEYP58557 167 aaPredicted RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 SYTL3Q4VX76 610 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 MPPE1Q53F39 396 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 FAM109BQ6ICB4 259 aaPredicted RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 KIAA1161Q6NSJ0 714 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 CTU1Q7Z7A3 348 aaKnown RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 TPRA1Q86W33 373 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 SKA3Q8IX90 412 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 RNF113BQ8IZP6 322 aaKnown RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 KRT78Q8N1N4 520 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 SVBPQ8N300 66 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 OXR1Q8N573 874 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 OR6K3Q8NGY3 331 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 RGMAQ96B86 450 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 UTP23Q9BRU9 249 aaKnown RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 POLR2J3Q9H1A7 115 aaKnown RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 UCK1Q9HA47 277 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 DNAJC11Q9NVH1 559 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 MGAT4CQ9UBM8 478 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 MKL2Q9ULH7 1088 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 CLCA2Q9UQC9 943 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 RUVBL1Q9Y265 456 aaKnown RBP10.1□□□□□ -0.79
CPEB1-215ENST00000617958 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
CPEB1-215ENST00000617958 PMS2P1A4D2B8 440 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 SNRPGP15A8MWD9 76 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 GPR182O15218 404 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 PRAMEF11O60813 436 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 EIF3GO75821 320 aaKnown RBP eCLIP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 KDM4BO94953 1096 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 GUCA1CO95843 209 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 GNRH1P01148 92 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 HEXAP06865 529 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 PIRTP0C851 137 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 HSD17B2P37059 387 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 FEN1P39748 380 aaKnown RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 GDF5P43026 501 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 CAPZA2P47755 286 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 MECP2P51608 486 aaKnown RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 ARHGDIBP52566 201 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 SMSP52788 366 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 PTPN5P54829 565 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 SMIM11AP58511 58 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 CDC42EP1Q00587 391 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 GAB1Q13480 694 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 HTR4Q13639 388 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 ZNF235Q14590 738 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 CPSF6Q16630 551 aaKnown RBP eCLIP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 TMEM44Q2T9K0 475 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 IDNKQ5T6J7 187 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 DEF8Q6ZN54 512 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 ARMC10Q8N2F6 343 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 LINC00471Q8N535 108 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 APOBEC4Q8WW27 367 aaKnown RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 LRR1Q96L50 414 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 WDR26Q9H7D7 661 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 SLC6A20Q9NP91 592 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 EXOSC3Q9NQT5 275 aaKnown RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 DPP7Q9UHL4 492 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 PCOLCE2Q9UKZ9 415 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 MYBPHLA2RUH7 354 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 MTMR11A4FU01 709 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 C2orf78A6NCI8 922 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 H3BN98 237 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 YY2O15391 372 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 TLX2O43763 284 aaPredicted RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 FZD7O75084 574 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 RGS9O75916 674 aaPredicted RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 HTR3BO95264 441 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 IL5P05113 134 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 LAMP1P11279 417 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 CD53P19397 219 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 SRP9P49458 86 aaKnown RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 STARP49675 285 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 SF1Q15637 639 aaKnown RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 EOGTQ5NDL2 527 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 DCST1Q5T197 706 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 ZNF660Q6AZW8 331 aaPredicted RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 HAGHLQ6PII5 290 aaPredicted RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 SLC36A4Q6YBV0 504 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 MRGPREQ86SM8 312 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 RNFT2Q96EX2 444 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 C11orf24Q96F05 449 aaPredicted RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 MRPL48Q96GC5 212 aaKnown RBP10.09□□□□□ -0.79
CPEB1-215ENST00000617958 MGME1Q9BQP7 344 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 TRBV4-1A0A0J9YWV2 114 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 TRBC2A0A5B9 178 aa10.09□□□□□ -0.79
CPEB1-215ENST00000617958 LRRN3E7EW58 273 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms