RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 TMIGD3P0DMS9 266 aaPredicted RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 EPXP11678 715 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 PRPS2P11908 318 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 PEPDP12955 493 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 ZNF708P17019 499 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 ASMTP46597 345 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 LHX2P50458 406 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 GAS1P54826 345 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 SRYQ05066 204 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 DAZAP2Q15038 168 aaPredicted RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 GLYR1Q49A26 553 aaPredicted RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 SH2D4BQ5SQS7 431 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 DCST1Q5T197 706 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 CLEC6AQ6EIG7 209 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 OR5M10Q6IEU7 315 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 TMEM107Q6UX40 140 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 Q6ZSR9 355 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 C10orf107Q8IVU9 208 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 C4orf33Q8N1A6 199 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 OR4N2Q8NGD1 307 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 ZFP28Q8NHY6 868 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 EPS8L3Q8TE67 593 aaKnown RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 PPCDCQ96CD2 204 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 MTERF3Q96E29 417 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 ZBED6CLQ96FA7 236 aaPredicted RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 EGLN2Q96KS0 407 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 TUBA1CQ9BQE3 449 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 LMF2Q9BU23 707 aaKnown RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 ROPN1BQ9BZX4 212 aaPredicted RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 PIGMQ9H3S5 423 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 REEP4Q9H6H4 257 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 ROPN1Q9HAT0 212 aaPredicted RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 RASSF1Q9NS23 344 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 ACSS1Q9NUB1 689 aaPredicted RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 FAM120CQ9NX05 1096 aaKnown RBP8.78□□□□□ -1
TARDBP-218ENST00000617172 MKS1Q9NXB0 559 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 CRIM1Q9NZV1 1036 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 STOML1Q9UBI4 398 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 FBXL2Q9UKC9 423 aa8.78□□□□□ -1
TARDBP-218ENST00000617172 CCDC168Q8NDH2 2452 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 A6NNC1 897 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 CLCA1A8K7I4 914 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 KDM4EB2RXH2 506 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 TMEM114B3SHH9 223 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 EEF1E1-BLOC1S5C9J1V9 151 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 PDPK1O15530 556 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 EEF1E1O43324 174 aaKnown RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 NPHS1O60500 1241 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 NME6O75414 186 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 SOX30O94993 753 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 NUDT17P0C025 328 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 DNAJA1P31689 397 aaKnown RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 GABRA3P34903 492 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 GPC1P35052 558 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 STARP49675 285 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 DIO3P55073 304 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 MANFP55145 182 aaKnown RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 WNT3P56703 355 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 OCRLQ01968 901 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 IFFO1Q0D2I5 559 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 C17orf67Q0P5P2 114 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 PCLAFQ15004 111 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 PRSS53Q2L4Q9 553 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 KANK2Q63ZY3 851 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 OR2A2Q6IF42 318 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 ZCCHC12Q6PEW1 402 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 LRIG3Q6UXM1 1119 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 R3HCC1LQ7Z5L2 792 aaKnown RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 GRAMD2AQ8IUY3 354 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 MEIOBQ8N635 442 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 FADS6Q8N9I5 356 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 BANPQ8N9N5 519 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 C9orf106Q8NAJ2 232 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 LRRN4CLQ8ND94 238 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 DUSP19Q8WTR2 217 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 APOPT1Q96IL0 206 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 FCRL1Q96LA6 429 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 GATA5Q9BWX5 397 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 CLEC4MQ9H2X3 399 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 C12orf65Q9H3J6 166 aaKnown RBP8.77□□□□□ -1.01
TARDBP-218ENST00000617172 DSN1Q9H410 356 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 TNFRSF12AQ9NP84 129 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 SH3BP4Q9P0V3 963 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 NTMQ9P121 344 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 TRAF6Q9Y4K3 522 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 DNAJC15Q9Y5T4 150 aa8.77□□□□□ -1.01
TARDBP-218ENST00000617172 HCFC1P51610 2035 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 POLQO75417 2590 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 LSM1O15116 133 aaKnown RBP8.76□□□□□ -1.01
TARDBP-218ENST00000617172 SCO2O43819 266 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 TNFRSF21O75509 655 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 LINC00032P0C843 101 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 TACR1P25103 407 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 MAPK1P28482 360 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 LCN1P31025 176 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 SERPINB5P36952 375 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 RPL3P39023 403 aaKnown RBP8.76□□□□□ -1.01
TARDBP-218ENST00000617172 FRKP42685 505 aaPredicted RBP8.76□□□□□ -1.01
TARDBP-218ENST00000617172 PCYT1AP49585 367 aa8.76□□□□□ -1.01
TARDBP-218ENST00000617172 AGFG1P52594 562 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms