RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZNF454Q8N9F8 522 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 OR6T1Q8NGN1 323 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 OR13C5Q8NGS8 318 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 RFKQ969G6 155 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 ORAI3Q9BRQ5 295 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 BTBD1Q9H0C5 482 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CHST8Q9H2A9 424 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 TDP1Q9NUW8 608 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 HPF1Q9NWY4 346 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 AK6Q9Y3D8 172 aaKnown RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 KNL1Q8NG31 2342 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 A0A1B0GVI7 797 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 H7C2Y5 167 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 MAGEB4O15481 346 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 CD160O95971 181 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 LPLP06858 475 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 C1SP09871 688 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 PYCR1P32322 319 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 GJA5P36382 358 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 GDI2P50395 445 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 GATMP50440 423 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 AKR1C2P52895 323 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 AKR1C1Q04828 323 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 MPEG1Q2M385 716 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ZNF697Q5TEC3 545 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 C18orf63Q68DL7 685 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ZNF770Q6IQ21 691 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 TMEM88Q6PEY1 159 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ATRAIDQ6UW56 229 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TMEM107Q6UX40 140 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 DDX53Q86TM3 631 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 SDR16C5Q8N3Y7 309 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 OR5M3Q8NGP4 307 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 WDR20Q8TBZ3 569 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 CHTF18Q8WVB6 975 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ARSGQ96EG1 525 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TREX2Q9BQ50 279 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 ARHGAP9Q9BRR9 750 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ZNF768Q9H5H4 540 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 AUNIPQ9H7T9 357 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 CACYBPQ9HB71 228 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 STARD7Q9NQZ5 370 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 SLCO1C1Q9NYB5 712 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 B4GALT6Q9UBX8 382 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 FKBP7Q9Y680 259 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 SPTBP11277 2137 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ALPK2Q86TB3 2170 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 LRRN3E7EW58 273 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 H3BNC9 293 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ZNF593O00488 134 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 SEMA7AO75326 666 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 RGS9O75916 674 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 CKMP06732 381 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 C8orf89P0DMQ9 161 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TFPIP10646 304 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 MMP12P39900 470 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 OPRD1P41143 372 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 RECQLP46063 649 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 STARP49675 285 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 HTR4Q13639 388 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ELOAQ14241 798 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 ZNF273Q14593 569 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 MELKQ14680 651 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ATXN7L3Q14CW9 347 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 IGSF11Q5DX21 431 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 OR5M10Q6IEU7 315 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 GRHL2Q6ISB3 625 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 PYHIN1Q6K0P9 492 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 SFXN4Q6P4A7 337 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 RSPO2Q6UXX9 243 aaPredicted RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 Q6ZTK2 550 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 GPAT4Q86UL3 456 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 SLITRK4Q8IW52 837 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ORAI1Q96D31 301 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 SCMH1Q96GD3 660 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 F2RL3Q96RI0 385 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 BBS4Q96RK4 519 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 GAL3ST1Q99999 423 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 MED18Q9BUE0 208 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TRMT61BQ9BVS5 477 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 LRRN3Q9H3W5 708 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TMEM38AQ9H6F2 299 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 CAPN10Q9HC96 672 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ZSCAN32Q9NX65 697 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TAS2R3Q9NYW6 316 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 NTNG1Q9Y2I2 539 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 SF3B6Q9Y3B4 125 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 TSC2P49815 1807 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 PDCD11Q14690 1871 aaKnown RBP6.27□□□□□ -1.41
LMO3-235ENST00000616247 A0A0C4DFX4 3053 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TMEM129A0AVI4 362 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 IRGMA1A4Y4 181 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 SLC22A23A1A5C7 686 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 TRABD2BA6NFA1 517 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 ANXA2P2A6NMY6 339 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 STK25O00506 426 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 RP2O75695 350 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 WNT1P04628 370 aa6.27□□□□□ -1.41
LMO3-235ENST00000616247 FAM157BP0CG42 384 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms