RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 FOXA1P55317 472 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 EEF1A1P68104 462 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 MRPS22P82650 360 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 ZNF763Q0D2J5 394 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 GLE1Q53GS7 698 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 EEF1A1P5Q5VTE0 462 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 VWA1Q6PCB0 445 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 OR2M3Q8NG83 312 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 ZNF592Q92610 1267 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 STARD4Q96DR4 205 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 SHCBP1LQ9BZQ2 653 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 GSTO2Q9H4Y5 243 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 NEUROD4Q9HD90 331 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 NDRG3Q9UGV2 375 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 SERTM1A2A2V5 107 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 SLC22A20A6NK97 555 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 MSTNO14793 375 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 CASKO14936 926 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 FADS1O60427 444 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 SMNDC1O75940 238 aaKnown RBP eCLIP18.76■□□□□ 0.593e-7■□□□□ 8.5
TRAPPC3-208ENST00000616074 PEPDP12955 493 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 CLDN15P56746 228 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 FAM27E3Q08E93 113 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 C2orf80Q0P641 193 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 SPDYAQ5MJ70 313 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 RAET1LQ5VY80 246 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 TMEM107Q6UX40 140 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 CHMP1BQ7LBR1 199 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 CNEP1R1Q8N9A8 125 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 MNS1Q8NEH6 495 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 FIG4Q92562 907 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 SMR3AQ99954 134 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 RTN4RQ9BZR6 473 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 MID1IP1Q9NPA3 183 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 BEX4Q9NWD9 120 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 MED11Q9P086 117 aa18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 EIF3LQ9Y262 564 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-208ENST00000616074 A0A087WV62 115 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 CCDC151A5D8V7 595 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 H0YC42 278 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 UBFD1O14562 309 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 CRHP06850 196 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 HK1P19367 917 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 SUCLG1P53597 346 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 TPD52P55327 224 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 STX5Q13190 355 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 CYP27C1Q4G0S4 372 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 OR2A2Q6IF42 318 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 FAM71E1Q6IPT2 247 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 MEIOBQ8N635 442 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 MIEF1Q9NQG6 463 aa18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 C6orf203Q9P0P8 240 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 C19orf53Q9UNZ5 99 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 POLR3HQ9Y535 204 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-208ENST00000616074 UPK1AO00322 258 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 SIAH2O43255 324 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 RIPK2O43353 540 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 PSMG1O95456 288 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 PYGBP11216 843 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 GANABQ14697 944 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 ZNF474Q6S9Z5 364 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 BTLAQ7Z6A9 289 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 BIVMQ86UB2 503 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 CXorf67Q86X51 503 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 CCNYL1Q8N7R7 359 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 OR5M1Q8NGP8 315 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.74■□□□□ 0.594e-25■■■■■ 29
TRAPPC3-208ENST00000616074 C18orf12Q96KH6 178 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 WFIKKN1Q96NZ8 548 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 OPN3Q9H1Y3 402 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 GLIPR2Q9H4G4 154 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 KLHL28Q9NXS3 571 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 EMCNQ9ULC0 261 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 GRID1Q9ULK0 1009 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 ABCG2Q9UNQ0 655 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 ZNF337Q9Y3M9 751 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 DNHD1Q96M86 4753 aa18.74■□□□□ 0.59
TRAPPC3-208ENST00000616074 NSD1Q96L73 2696 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 SEC14L5O43304 696 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 CTIFO43310 598 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 SLITRK5O94991 958 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 GSTA1P08263 222 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 CD79BP40259 229 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 KIR2DL2P43627 348 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 SIRPAP78324 504 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 NKX6-1P78426 367 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 DECR1Q16698 335 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 TRMT10CQ7L0Y3 403 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 OR2L13Q8N349 312 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 ACMSDQ8TDX5 336 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 MZB1Q8WU39 189 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 PGM2Q96G03 612 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 FAM111AQ96PZ2 611 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 PINK1Q9BXM7 581 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 Q9N2J8 555 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 MYNNQ9NPC7 610 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 SDHAF3Q9NRP4 125 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 DDX18Q9NVP1 670 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 TAS2R7Q9NYW3 318 aa18.73■□□□□ 0.59
TRAPPC3-208ENST00000616074 OR2M5A3KFT3 312 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms